RNA–Protein interactions for RNA: ENST00000409190.7

SYNC-202, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SYNC, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-202ENST00000409190 NOMO1Q15155 1222 aa17.46■□□□□ 0.39
SYNC-202ENST00000409190 GJC2Q5T442 439 aaPredicted RBP17.46■□□□□ 0.39
SYNC-202ENST00000409190 CAND1Q86VP6 1230 aaKnown RBP17.46■□□□□ 0.39
SYNC-202ENST00000409190 NIPA2Q8N8Q9 360 aa17.46■□□□□ 0.39
SYNC-202ENST00000409190 FAM172AQ8WUF8 416 aa17.46■□□□□ 0.39
SYNC-202ENST00000409190 DNAJC16Q9Y2G8 782 aa17.46■□□□□ 0.39
SYNC-202ENST00000409190 CEP350Q5VT06 3117 aa17.46■□□□□ 0.38
SYNC-202ENST00000409190 LOXHD1Q8IVV2 1947 aa17.46■□□□□ 0.38
SYNC-202ENST00000409190 FARP2O94887 1054 aaPredicted RBP17.45■□□□□ 0.38
SYNC-202ENST00000409190 ATG7O95352 703 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 STX3Q13277 289 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 OLIG2Q13516 323 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 KCNJ11Q14654 390 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 AGBL3Q8NEM8 1001 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 ZNF398Q8TD17 642 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 FAM189A1O60320 539 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 DHRS4L1P0CG22 281 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 PAPOLAP51003 745 aaKnown RBP17.45■□□□□ 0.38
SYNC-202ENST00000409190 NDST1P52848 882 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 TCHHL1Q5QJ38 904 aaPredicted RBP17.45■□□□□ 0.38
SYNC-202ENST00000409190 RASIP1Q5U651 963 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 REPS2Q8NFH8 660 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 CMASQ8NFW8 434 aaPredicted RBP17.45■□□□□ 0.38
SYNC-202ENST00000409190 TMEM176AQ96HP8 235 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 GBP5Q96PP8 586 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 ZNF184Q99676 751 aaPredicted RBP17.45■□□□□ 0.38
SYNC-202ENST00000409190 KLC2Q9H0B6 622 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 PPCSQ9HAB8 311 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 MAN1C1Q9NR34 630 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 ETNK2Q9NVF9 386 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 ZNF358Q9NW07 568 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 TSPAN16Q9UKR8 245 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 GPR25O00155 361 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 SMAPO00193 183 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 RFPL1O75677 317 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 PIGRP01833 764 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 ZRSR2Q15696 482 aaKnown RBP17.45■□□□□ 0.38
SYNC-202ENST00000409190 PPM1JQ5JR12 505 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 LPCAT4Q643R3 524 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 PPP1R2P3Q6NXS1 205 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 XRRA1Q6P2D8 792 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 CLMNQ96JQ2 1002 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 RNF157Q96PX1 679 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 POPDC2Q9HBU9 364 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 NDE1Q9NXR1 346 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 PCDHGC3Q9UN70 934 aa17.45■□□□□ 0.38
SYNC-202ENST00000409190 SPDYE16A6NNV3 312 aaPredicted RBP17.44■□□□□ 0.38
SYNC-202ENST00000409190 APOL1O14791 398 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 IQCF3P0C7M6 154 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 ANPEPP15144 967 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 ATG16L1Q676U5 607 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 ARHGAP24Q8N264 748 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 PCDH19Q8TAB3 1148 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 PGBD4Q96DM1 585 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 USP29Q9HBJ7 922 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 SSU72Q9NP77 194 aaKnown RBP17.44■□□□□ 0.38
SYNC-202ENST00000409190 WDR27A2RRH5 827 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 CLGNO14967 610 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 ARIH2O95376 493 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 STIP1P31948 543 aaKnown RBP17.44■□□□□ 0.38
SYNC-202ENST00000409190 GMPSP49915 693 aaPredicted RBP17.44■□□□□ 0.38
SYNC-202ENST00000409190 PGGT1BP53609 377 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 SLC18A2Q05940 514 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 ANGEL2Q5VTE6 544 aaKnown RBP17.44■□□□□ 0.38
SYNC-202ENST00000409190 ACOT1Q86TX2 421 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 FAM136AQ96C01 138 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 WWP1Q9H0M0 922 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 CDT1Q9H211 546 aa17.44■□□□□ 0.38
SYNC-202ENST00000409190 STX18Q9P2W9 335 aaKnown RBP17.44■□□□□ 0.38
SYNC-202ENST00000409190 COL2A1P02458 1487 aaPredicted RBP17.44■□□□□ 0.38
SYNC-202ENST00000409190 SAT1P21673 171 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 SERPINB6P35237 376 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 MSX2P35548 267 aaPredicted RBP17.43■□□□□ 0.38
SYNC-202ENST00000409190 FASTKD1Q53R41 847 aaKnown RBP17.43■□□□□ 0.38
SYNC-202ENST00000409190 LGSNQ5TDP6 509 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 FOXB2Q5VYV0 432 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 MPZL3Q6UWV2 235 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 ZPBP2Q6X784 338 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 TMPRSS6Q8IU80 811 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 CLEC4CQ8WTT0 213 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 PLAC1Q9HBJ0 212 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 PNPOQ9NVS9 261 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 CNTN3Q9P232 1028 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 DNAH12Q6ZR08 3092 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 SLC15A5A6NIM6 579 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 LIN7AO14910 233 aaPredicted RBP17.43■□□□□ 0.38
SYNC-202ENST00000409190 OPHN1O60890 802 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 KRT38O76015 456 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 APOEP02649 317 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 PTPN7P35236 360 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 GPD2P43304 727 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 MCCD1P59942 119 aaPredicted RBP17.43■□□□□ 0.38
SYNC-202ENST00000409190 PDE1BQ01064 536 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 TFDP2Q14188 446 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 AP1ARQ63HQ0 302 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 IRGCQ6NXR0 463 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 SH2D5Q6ZV89 423 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 CHSY1Q86X52 802 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 STKLD1Q8NE28 680 aa17.43■□□□□ 0.38
SYNC-202ENST00000409190 FGD4Q96M96 766 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms