RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 CNGB3Q9NQW8 809 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 ABCC13Q9NSE7 274 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 USP3Q9Y6I4 520 aa13.5□□□□□ -0.25
SNORD88B-201ENST00000408454 HOXB2P14652 356 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 TYRP14679 529 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 TIE1P35590 1138 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 YWHAGP61981 247 aaKnown RBP eCLIP13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 KDSRQ06136 332 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 PDE4CQ08493 712 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 MEA1Q16626 185 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 ZNF394Q53GI3 561 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 PPP1R26Q5T8A7 1209 aaPredicted RBP13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 NUGGCQ68CJ6 796 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 PMS2CLQ68D20 193 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 RNF43Q68DV7 783 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 KBTBD6Q86V97 674 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 UNC45BQ8IWX7 931 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 ETFBKMTQ8IXQ9 262 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 ZC3H3Q8IXZ2 948 aaKnown RBP13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 CPXM2Q8N436 756 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 IL17RCQ8NAC3 791 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 TXNDC5Q8NBS9 432 aaKnown RBP13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 ZMIZ2Q8NF64 920 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 RIN3Q8TB24 985 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 IRGQQ8WZA9 623 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 FOXJ1Q92949 421 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 MARCH2Q9P0N8 246 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 DACH1Q9UI36 760 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 RASAL2Q9UJF2 1139 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 NME7Q9Y5B8 376 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 COL4A3Q01955 1670 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 GREB1Q4ZG55 1949 aa13.49□□□□□ -0.25
SNORD88B-201ENST00000408454 A0A1W2PQH9 124 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 BCLAF3A2AJT9 711 aaKnown RBP13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 CYP26A1O43174 497 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 SYNCRIPO60506 623 aaKnown RBP13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 GNSP15586 552 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 ACADSBP45954 432 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 SLC11A2P49281 568 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 FMO5P49326 533 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 TKTL1P51854 596 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 GCNT1Q02742 428 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 DMWDQ09019 674 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 PAK1Q13153 545 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 HNRNPDQ14103 355 aaKnown RBP13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 MPPE1Q53F39 396 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 C1orf220Q5T0J3 134 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 PIGZQ86VD9 579 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 MIB1Q86YT6 1006 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 FAM114A1Q8IWE2 563 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 PPM1KQ8N3J5 372 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 CCDC33Q8N5R6 958 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 ALLCQ8N6M5 410 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 WFIKKN2Q8TEU8 576 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 KCTD13Q8WZ19 329 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 ZFRQ96KR1 1074 aaKnown RBP13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 PPP1R9BQ96SB3 815 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 DUSP15Q9H1R2 295 aaPredicted RBP13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 APOBEC3GQ9HC16 384 aaKnown RBP13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 GDPD2Q9HCC8 539 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 FBRSL1Q9HCM7 1045 aaKnown RBP13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 TMEM30AQ9NV96 361 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 EVLQ9UI08 416 aaPredicted RBP13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 SLC27A6Q9Y2P4 619 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 OTOGLQ3ZCN5 2332 aa13.48□□□□□ -0.25
SNORD88B-201ENST00000408454 ANAPC1Q9H1A4 1944 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 TCRBV21S2A2A0A5A6 115 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 IRAK2O43187 625 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 NDUFS2O75306 463 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 TGM1P22735 817 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 OXTRP30559 389 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 KIR2DL1P43626 348 aaPredicted RBP13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 PXNP49023 591 aaPredicted RBP13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 DHPSP49366 369 aaPredicted RBP13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 RAD23BP54727 409 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 ORC1Q13415 861 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 TPD52L1Q16890 204 aaPredicted RBP13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 RAB41Q5JT25 222 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 PLA2G2CQ5R387 149 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 LYSMD4Q5XG99 296 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 ANKRD40Q6AI12 368 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 SCARA3Q6AZY7 606 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 PM20D1Q6GTS8 502 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 ANKS1BQ7Z6G8 1248 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 SYT12Q8IV01 421 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 SLC4A11Q8NBS3 891 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 ENGASEQ8NFI3 743 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 HMGB4Q8WW32 186 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 SLC35C1Q96A29 364 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 HSFY1Q96LI6 401 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 NOX5Q96PH1 765 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 EDEM2Q9BV94 578 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 SLC32A1Q9H598 525 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 PARD6AQ9NPB6 346 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 TMEM9BQ9NQ34 198 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 HMGXB4Q9UGU5 601 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 TSPAN16Q9UKR8 245 aa13.47□□□□□ -0.25
SNORD88B-201ENST00000408454 EP300Q09472 2414 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms