RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 RUBCNQ92622 972 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 PGBD1Q96JS3 809 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 MAELQ96JY0 434 aaKnown RBP5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 SLC46A1Q96NT5 459 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 HELLSQ9NRZ9 838 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 TMEM160Q9NX00 188 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 ZSCAN32Q9NX65 697 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 ZNHIT2Q9UHR6 403 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 FBXO2Q9UK22 296 aaPredicted RBP5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 LAS1LQ9Y4W2 734 aaKnown RBP5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 COX11Q9Y6N1 276 aa5.64□□□□□ -1.51
HMGB1P13-201ENST00000406019 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 A6NLC8 198 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 hCG_1984214I3L0E3 225 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 DHHO43323 396 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 COQ9O75208 318 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 VPS4BO75351 444 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 USP1O94782 785 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 HSP90AA1P07900 732 aaKnown RBP5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 RHOP08100 348 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 ATXN1LP0C7T5 689 aaKnown RBP5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 ARP10275 920 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 LIFRP42702 1097 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 PAPOLAP51003 745 aaKnown RBP5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 CCR5P51681 352 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 CACNA2D1P54289 1103 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 CUL4BQ13620 913 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 ATP1A4Q13733 1029 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 KCNAB1Q14722 419 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 NBPF8Q3BBV2 869 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 RBM20Q5T481 1227 aaKnown RBP5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 MANEALQ5VSG8 457 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 FAAH2Q6GMR7 532 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 ZNF280BQ86YH2 543 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 CCDC117Q8IWD4 279 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 RFKQ969G6 155 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 SEMA4GQ9NTN9 838 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 SHOC2Q9UQ13 582 aa5.63□□□□□ -1.51
HMGB1P13-201ENST00000406019 HMX3A6NHT5 357 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 DNPH1O43598 174 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 BAIAP3O94812 1187 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 TK1P04183 234 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 PRKCBP05771 671 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 ANXA6P08133 673 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 JUPP14923 745 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 DGKEP52429 567 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 NXPH1P58417 271 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 ACTR2P61160 394 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 VAMP2P63027 116 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 IRX6P78412 446 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 MGAT5BQ3V5L5 792 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 PREPLQ4J6C6 727 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 ANKRD45Q5TZF3 282 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 CFAP161Q6P656 301 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 HEATR4Q86WZ0 1026 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 OR6Y1Q8NGX8 325 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 TFAP2BQ92481 460 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 HTRA1Q92743 480 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 ZNF764Q96H86 408 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 NEUROD6Q96NK8 337 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 KRTAP17-1Q9BYP8 105 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 TTYH3Q9C0H2 523 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 RIOX1Q9H6W3 641 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 SMC4Q9NTJ3 1288 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 LRIT1Q9P2V4 623 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 TLK1Q9UKI8 766 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 HPSEQ9Y251 543 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 INSL6Q9Y581 213 aa5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 COL11A2P13942 1736 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P13-201ENST00000406019 H0Y3Z8 333 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 PIAS2O75928 621 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 IFIT1P09914 478 aaKnown RBP5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 XBP1P17861 261 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 KCNA3P22001 575 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 LRPAP1P30533 357 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 GRIA3P42263 894 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 BCAT1P54687 386 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 ALDH18A1P54886 795 aaKnown RBP5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 NR1H2P55055 460 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 LOXL3P58215 753 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 ITIH3Q06033 890 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 TRPC3Q13507 836 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 KCTD2Q14681 263 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 FBXO42Q6P3S6 717 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 BBS12Q6ZW61 710 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 ANKS1BQ7Z6G8 1248 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 RASGRP3Q8IV61 690 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 NRSN1Q8IZ57 195 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 BPIFB1Q8TDL5 484 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 AFG1LQ8WV93 481 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 HDAC2Q92769 488 aaKnown RBP5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 ZDHHC12Q96GR4 267 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 FBXL20Q96IG2 436 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 CRAMP1Q96RY5 1269 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 TIMP4Q99727 224 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 DUSP26Q9BV47 211 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 TRIM5Q9C035 493 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 SLC25A32Q9H2D1 315 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 JMJD4Q9H9V9 463 aa5.61□□□□□ -1.51
HMGB1P13-201ENST00000406019 SEPSECSQ9HD40 501 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms