RNA–Protein interactions for RNA: ENST00000404933.6

SMS-202, Transcript of spermine synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMS, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMS-202ENST00000404933 MAPRE1Q15691 268 aaKnown RBP12.31□□□□□ -0.44
SMS-202ENST00000404933 LACTB2Q53H82 288 aaPredicted RBP12.31□□□□□ -0.44
SMS-202ENST00000404933 DCAF6Q58WW2 860 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 NOMO2Q5JPE7 1267 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 INTS6LQ5JSJ4 861 aaKnown RBP12.31□□□□□ -0.44
SMS-202ENST00000404933 RAB41Q5JT25 222 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 OVOS1Q6IE37 1185 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 FAM171BQ6P995 826 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 FAM43BQ6ZT52 329 aaPredicted RBP12.31□□□□□ -0.44
SMS-202ENST00000404933 RELL1Q8IUW5 271 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 PSTKQ8IV42 348 aaKnown RBP12.31□□□□□ -0.44
SMS-202ENST00000404933 SH2D3CQ8N5H7 860 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 LINC01599Q8WXQ3 324 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 NT5C3BQ969T7 300 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 FAF2Q96CS3 445 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 SLC2A13Q96QE2 648 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 TMEM109Q9BVC6 243 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 ADAM7Q9H2U9 754 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 POPDC2Q9HBU9 364 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 AP4E1Q9UPM8 1137 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 TRIM17Q9Y577 477 aa12.31□□□□□ -0.44
SMS-202ENST00000404933 DNM1LO00429 736 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 TTC4O95801 387 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 SHBGP04278 402 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 ZFXP17010 805 aaPredicted RBP12.3□□□□□ -0.44
SMS-202ENST00000404933 L1CAMP32004 1257 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 NDUFV1P49821 464 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 BCAR1P56945 870 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 DAOAP59103 153 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 ROR1Q01973 937 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 CA9Q16790 459 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 PPP6R3Q5H9R7 873 aaPredicted RBP12.3□□□□□ -0.44
SMS-202ENST00000404933 CLLU1OSQ5K130 101 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 SLC9A4Q6AI14 798 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 PLD5Q8N7P1 536 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 ZMIZ2Q8NF64 920 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 PCDH19Q8TAB3 1148 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 HASPINQ8TF76 798 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 NDRG1Q92597 394 aaKnown RBP12.3□□□□□ -0.44
SMS-202ENST00000404933 MYLPFQ96A32 169 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 NPY6RQ99463 290 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 ADAM33Q9BZ11 813 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 ULBP1Q9BZM6 244 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 DHX35Q9H5Z1 703 aaKnown RBP12.3□□□□□ -0.44
SMS-202ENST00000404933 CSNK1G1Q9HCP0 422 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 BCCIPQ9P287 314 aaKnown RBP eCLIP12.3□□□□□ -0.44
SMS-202ENST00000404933 PCDHB8Q9UN66 801 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 SHOC2Q9UQ13 582 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 TRAPPC3O43617 180 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 RASSF9O75901 435 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 YY1P25490 414 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 ATXN1P54253 815 aaKnown RBP12.3□□□□□ -0.44
SMS-202ENST00000404933 TSPY1Q01534 308 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 DSC1Q08554 894 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 C6orf118Q5T5N4 469 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 RNASEH2BQ5TBB1 312 aaKnown RBP12.3□□□□□ -0.44
SMS-202ENST00000404933 DARS2Q6PI48 645 aaKnown RBP12.3□□□□□ -0.44
SMS-202ENST00000404933 C1orf228Q6PIY5 440 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 NPNTQ6UXI9 565 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 CCDC121Q6ZUS5 278 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 UNC45BQ8IWX7 931 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 PLCD3Q8N3E9 789 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 PQLC3Q8N755 202 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 SH3TC2Q8TF17 1288 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 PGM2Q96G03 612 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 KCNK16Q96T55 309 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 ROPN1BQ9BZX4 212 aaPredicted RBP12.3□□□□□ -0.44
SMS-202ENST00000404933 ROPN1Q9HAT0 212 aaPredicted RBP12.3□□□□□ -0.44
SMS-202ENST00000404933 PRDM16Q9HAZ2 1276 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 TMEM161AQ9NX61 479 aa12.3□□□□□ -0.44
SMS-202ENST00000404933 RCOR3Q9P2K3 495 aaPredicted RBP12.3□□□□□ -0.44
SMS-202ENST00000404933 PTPRDP23468 1912 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 CFAP69A5D8W1 941 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 HHLA1C9JL84 531 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 H7C0C1 242 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 TMEM189-UBE2V1I3L0A0 370 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 SMAPO00193 183 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 CAPN9O14815 690 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 ZBED1O96006 694 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 ITGB1P05556 798 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 CYP2F1P24903 491 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 RPL22P35268 128 aaKnown RBP12.29□□□□□ -0.44
SMS-202ENST00000404933 ATP5OP48047 213 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 ATP1A2P50993 1020 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 GDF10P55107 478 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 RNASELQ05823 741 aaKnown RBP12.29□□□□□ -0.44
SMS-202ENST00000404933 FBXW10Q5XX13 1052 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 BNIPLQ7Z465 357 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 FAM126BQ8IXS8 530 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 PPIL6Q8IXY8 311 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 CCDC185Q8N715 623 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 FAM71DQ8N9W8 422 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 IRGQQ8WZA9 623 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 FAM193BQ96PV7 902 aaPredicted RBP12.29□□□□□ -0.44
SMS-202ENST00000404933 RBM15Q96T37 977 aaKnown RBP eCLIP12.29□□□□□ -0.44
SMS-202ENST00000404933 PKMYT1Q99640 499 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 UNC93B1Q9H1C4 597 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 ELAC1Q9H777 363 aaKnown RBP12.29□□□□□ -0.44
SMS-202ENST00000404933 NRDE2Q9H7Z3 1164 aa12.29□□□□□ -0.44
SMS-202ENST00000404933 PNPLA8Q9NP80 782 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms