RNA–Protein interactions for RNA: ENST00000403495.2

HMGB1P17-201, Transcript of high mobility group box 1 pseudogene 17, humanhuman

BASIC

Gene HMGB1P17, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P17-201ENST00000403495 RALBP1Q15311 655 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 FAM110CQ1W6H9 321 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 ADCK5Q3MIX3 580 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 AASDHQ4L235 1098 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 FBLN7Q53RD9 439 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 FBXO47Q5MNV8 452 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 TTC22Q5TAA0 569 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 JAKMIP3Q5VZ66 844 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 ANKRD40Q6AI12 368 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 CCDC144NLQ6NUI1 221 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 ARMC6Q6NXE6 501 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 C16orf89Q6UX73 402 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 RAB11FIP2Q7L804 512 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 KRT27Q7Z3Y8 459 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 LRRTM4Q86VH4 590 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 TTC30AQ86WT1 665 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 VRK3Q8IV63 474 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 CEP70Q8NHQ1 597 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 SPPL3Q8TCT6 385 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 CTHRC1Q96CG8 243 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 EIF3CQ99613 913 aaKnown RBP4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 PYM1Q9BRP8 204 aaKnown RBP4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 KRTAP4-11Q9BYQ6 195 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 MAF1Q9H063 256 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 CCDC134Q9H6E4 229 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 RMI1Q9H9A7 625 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 SAP30LQ9HAJ7 183 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 KLC4Q9NSK0 619 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 EHD3Q9NZN3 535 aa4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 NKX1-2Q9UD57 310 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P17-201ENST00000403495 WDR27A2RRH5 827 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 AGAP5A6NIR3 686 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 PSMD9O00233 223 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 CES2O00748 559 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 CTIFO43310 598 aaKnown RBP4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 PRKCBP05771 671 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 CREB1P16220 341 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 SERPINA4P29622 427 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 GKP32189 559 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 PTGS2P35354 604 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 AARSP49588 968 aaKnown RBP eCLIP4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 TUBP50607 506 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 EFEMP1Q12805 493 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 LSM12Q3MHD2 195 aaKnown RBP4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 ZNF618Q5T7W0 954 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 ERICH6BQ5W0A0 696 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 FAM90A2PQ658T7 463 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 LAIR1Q6GTX8 287 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 NFRKBQ6P4R8 1299 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 Q6ZNX1 250 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 PEG10Q86TG7 708 aaKnown RBP4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 TRABD2AQ86V40 505 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 TMTC1Q8IUR5 882 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 LCORLQ8N3X6 602 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 OR6Y1Q8NGX8 325 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 PNISRQ8TF01 805 aaKnown RBP4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 WDR60Q8WVS4 1066 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 THAP4Q8WY91 577 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 LENG9Q96B70 501 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 ZNF503Q96F45 646 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 PGBD1Q96JS3 809 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 KRTAP4-5Q9BYR2 181 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 MMRN2Q9H8L6 949 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 PRDM16Q9HAZ2 1276 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 C19orf53Q9UNZ5 99 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 RCE1Q9Y256 329 aa4.44□□□□□ -1.7
HMGB1P17-201ENST00000403495 SLC38A8A6NNN8 435 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 LINC00473A8K010 186 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 STX16-NPEPL1H3BU86 382 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 STX16O14662 325 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 EBLN1P0CF75 366 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 CYP2C18P33260 490 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 FOLR3P41439 243 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 TPTEP56180 551 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 POLE2P56282 527 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 ACTR2P61160 394 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 SEMA3BQ13214 749 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 G3BP1Q13283 466 aaKnown RBP eCLIP4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 FOXE3Q13461 319 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 SLC12A1Q13621 1099 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 CLCA4Q14CN2 919 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 DLGAP5Q15398 846 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 TRIM60Q495X7 471 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 L1TD1Q5T7N2 865 aaKnown RBP4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 ABHD17BQ5VST6 288 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 KAZNQ674X7 775 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 Q6ZWC4 215 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 ESX1Q8N693 406 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 MAELQ96JY0 434 aaKnown RBP4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 PBKQ96KB5 322 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 LENG8Q96PV6 779 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 MACROD1Q9BQ69 325 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 NUDT22Q9BRQ3 303 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 C1QTNF3Q9BXJ4 246 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 ARHGAP39Q9C0H5 1083 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 ARHGEF3Q9NR81 526 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 DLL3Q9NYJ7 618 aa4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 CNOT11Q9UKZ1 510 aaKnown RBP4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 TRPC5Q9UL62 973 aaPredicted RBP4.43□□□□□ -1.7
HMGB1P17-201ENST00000403495 CCDC187A0A096LP49 1063 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms