RNA–Protein interactions for RNA: ENST00000402667.1

DNMT3A-205, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DNMT3A, Length 2,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-205ENST00000402667 RNF43Q68DV7 783 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 SUGP1Q8IWZ8 645 aaKnown RBP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 FITM2Q8N6M3 262 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 SMG8Q8ND04 991 aaKnown RBP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 CCDC110Q8TBZ0 833 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 TSPAN18Q96SJ8 248 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 ETNK1Q9HBU6 452 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 SLCO1B3Q9NPD5 702 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 PHTF1Q9UMS5 762 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 AP4E1Q9UPM8 1137 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 STARD13Q9Y3M8 1113 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 HUS1O60921 280 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 TKTP29401 623 aaKnown RBP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 CPT1AP50416 773 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 LILRA4P59901 499 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 YWHAZP63104 245 aaKnown RBP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 KBTBD12Q3ZCT8 623 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 SV2CQ496J9 727 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 ADGRF2Q8IZF7 708 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 CCDC185Q8N715 623 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 GBP7Q8N8V2 638 aaPredicted RBP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 CCDC63Q8NA47 563 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 LRRC8CQ8TDW0 803 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 FRMD8Q9BZ67 464 aaPredicted RBP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 KLC2Q9H0B6 622 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 RXFP1Q9HBX9 757 aa17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.6■□□□□ 0.41
DNMT3A-205ENST00000402667 GOLGA8RI6L899 631 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 SPAG6O75602 509 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 MAGEA6P43360 314 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 CAND1Q86VP6 1230 aaKnown RBP17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 OSTM1Q86WC4 334 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 ECHDC2Q86YB7 292 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 CDKL3Q8IVW4 592 aaPredicted RBP17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 BANPQ8N9N5 519 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 SLC44A1Q8WWI5 657 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 TNIP3Q96KP6 325 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 KCTD15Q96SI1 283 aaPredicted RBP17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 KLF6Q99612 283 aaPredicted RBP17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 APRTP07741 180 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 ZFXP17010 805 aaPredicted RBP17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 BNIP1Q12981 228 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 SLC45A4Q5BKX6 768 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 PIGZQ86VD9 579 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 TCP10LQ8TDR4 215 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 NDRG1Q92597 394 aaKnown RBP17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 ALKBH8Q96BT7 664 aaKnown RBP17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 CSPG4P5Q96PW8 444 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 DNAI2Q9GZS0 605 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 GTF2IRD1Q9UHL9 959 aa17.59■□□□□ 0.41
DNMT3A-205ENST00000402667 C17orf102A2RUQ5 167 aa17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 XPO1O14980 1071 aaKnown RBP17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 EDF1O60869 148 aaKnown RBP17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 ADRA1DP25100 572 aa17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 PTK7Q13308 1070 aa17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 EFHC1Q5JVL4 640 aa17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 STRADAQ7RTN6 431 aa17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 PRPF39Q86UA1 669 aaKnown RBP17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 B3GALNT2Q8NCR0 500 aa17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 CFAP36Q96G28 342 aa17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 AP5M1Q9H0R1 490 aa17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 PNPLA8Q9NP80 782 aa17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 IKBKGQ9Y6K9 419 aa17.58■□□□□ 0.41
DNMT3A-205ENST00000402667 IQANK1A0A1B0GTG1 560 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 METTL18O95568 372 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 MT-ND3P03897 115 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 WARSP23381 471 aaKnown RBP17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 MATKP42679 507 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 NR2C2P49116 596 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 NCALDP61601 193 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 KCNT2Q6UVM3 1135 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 DEFB106AQ8N104 65 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 CCDC33Q8N5R6 958 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 ZNF75CPQ92670 426 aaPredicted RBP17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 THOC1Q96FV9 657 aaKnown RBP17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 HNRNPABQ99729 332 aaKnown RBP17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 ECT2Q9H8V3 914 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 POPDC2Q9HBU9 364 aa17.58■□□□□ 0.4
DNMT3A-205ENST00000402667 TM9SF1O15321 606 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 GCATO75600 419 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 C1QAP02745 245 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 INHBAP08476 426 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 CYP2B6P20813 491 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 AMPD1P23109 780 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 FAAP100Q0VG06 881 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 SEPT7Q16181 437 aaKnown RBP17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 C4orf22Q6V702 233 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 PARP9Q8IXQ6 854 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 PYROXD2Q8N2H3 581 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 NME8Q8N427 588 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 TOP6BLQ8N6T0 577 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 MCUQ8NE86 351 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 DUSP16Q9BY84 665 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 C12orf65Q9H3J6 166 aaKnown RBP17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 ZC3H7BQ9UGR2 993 aaKnown RBP17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 TTLL3Q9Y4R7 772 aa17.57■□□□□ 0.4
DNMT3A-205ENST00000402667 IGF2BP3O00425 579 aaKnown RBP eCLIP17.56■□□□□ 0.4
DNMT3A-205ENST00000402667 CLDN5O00501 218 aa17.56■□□□□ 0.4
DNMT3A-205ENST00000402667 PTGESO14684 152 aa17.56■□□□□ 0.4
DNMT3A-205ENST00000402667 HGSO14964 777 aaPredicted RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms