RNA–Protein interactions for RNA: ENST00000399448.5

PTPN6-202, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN6, Length 2,159 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-202ENST00000399448 TTC39BQ5VTQ0 682 aaPredicted RBP14.22□□□□□ -0.13
PTPN6-202ENST00000399448 ANKRD23Q86SG2 305 aa14.22□□□□□ -0.13
PTPN6-202ENST00000399448 CEP57Q86XR8 500 aa14.22□□□□□ -0.13
PTPN6-202ENST00000399448 CCDC110Q8TBZ0 833 aa14.22□□□□□ -0.13
PTPN6-202ENST00000399448 APOPT1Q96IL0 206 aa14.22□□□□□ -0.13
PTPN6-202ENST00000399448 SERAC1Q96JX3 654 aa14.22□□□□□ -0.13
PTPN6-202ENST00000399448 OSMRQ99650 979 aa14.22□□□□□ -0.13
PTPN6-202ENST00000399448 LPIN3Q9BQK8 851 aa14.22□□□□□ -0.13
PTPN6-202ENST00000399448 TRIM6Q9C030 488 aaPredicted RBP14.22□□□□□ -0.13
PTPN6-202ENST00000399448 DHX35Q9H5Z1 703 aaKnown RBP14.22□□□□□ -0.13
PTPN6-202ENST00000399448 POPDC2Q9HBU9 364 aa14.22□□□□□ -0.13
PTPN6-202ENST00000399448 ZC3H7BQ9UGR2 993 aaKnown RBP14.22□□□□□ -0.13
PTPN6-202ENST00000399448 TTLL3Q9Y4R7 772 aa14.22□□□□□ -0.13
PTPN6-202ENST00000399448 NRCAMQ92823 1304 aa14.22□□□□□ -0.13
PTPN6-202ENST00000399448 RALGAPA2Q2PPJ7 1873 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 C2CD2LO14523 706 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 C1QAP02745 245 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 APRTP07741 180 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 PDGFRBP09619 1106 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 DHRS4L1P0CG22 281 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 SMIM10L2AP0DMW4 78 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 SMIM10L2BP0DMW5 78 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 TROVE2P10155 538 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTPN6-202ENST00000399448 FBXO47Q5MNV8 452 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 LGSNQ5TDP6 509 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 FAXCQ5TGI0 409 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 PRPF39Q86UA1 669 aaKnown RBP14.21□□□□□ -0.13
PTPN6-202ENST00000399448 CHSY1Q86X52 802 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 KBTBD7Q8WVZ9 684 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 RAB3IPQ96QF0 476 aaPredicted RBP14.21□□□□□ -0.13
PTPN6-202ENST00000399448 TSPAN18Q96SJ8 248 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 SNX25Q9H3E2 840 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 NXF3Q9H4D5 531 aaKnown RBP14.21□□□□□ -0.13
PTPN6-202ENST00000399448 GDAP2Q9NXN4 497 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 GTF2IRD1Q9UHL9 959 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 ZNF180Q9UJW8 692 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 TRIM33Q9UPN9 1127 aa14.21□□□□□ -0.13
PTPN6-202ENST00000399448 TRIP11Q15643 1979 aa14.21□□□□□ -0.14
PTPN6-202ENST00000399448 KPNA7A9QM74 516 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 MAP3K6O95382 1288 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 CYP2C9P11712 490 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 LCP1P13796 627 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 CCDC130P13994 396 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 PRKCHP24723 683 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 ADORA2BP29275 332 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 ETV4P43268 484 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 CCDC91Q7Z6B0 441 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 PLEKHH3Q7Z736 793 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 LRRC6Q86X45 466 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 VPS52Q8N1B4 723 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 PPM1NQ8N819 430 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 CLEC4CQ8WTT0 213 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 BRI3BPQ8WY22 251 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 HSFY1Q96LI6 401 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 ZNF560Q96MR9 790 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 C12orf65Q9H3J6 166 aaKnown RBP14.2□□□□□ -0.14
PTPN6-202ENST00000399448 AP4E1Q9UPM8 1137 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 SMIM28A0A1B0GU29 152 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 MBLAC1A4D2B0 266 aaPredicted RBP14.2□□□□□ -0.14
PTPN6-202ENST00000399448 DYNC1LI2O43237 492 aaPredicted RBP14.2□□□□□ -0.14
PTPN6-202ENST00000399448 XPOTO43592 962 aaKnown RBP14.2□□□□□ -0.14
PTPN6-202ENST00000399448 HCRTO43612 131 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 CAPN15O75808 1086 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 KRT37O76014 449 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 SNRPAP09012 282 aaKnown RBP14.2□□□□□ -0.14
PTPN6-202ENST00000399448 PYGBP11216 843 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 EZRP15311 586 aaKnown RBP14.2□□□□□ -0.14
PTPN6-202ENST00000399448 TPSB2P20231 275 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 AKAP5P24588 427 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 LMO2P25791 158 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 PNPLA4P41247 253 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 GBE1Q04446 702 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 SLC10A2Q12908 348 aaPredicted RBP14.2□□□□□ -0.14
PTPN6-202ENST00000399448 TPSAB1Q15661 275 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 FAM182AQ5T1J6 154 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 CTAGE3PQ8IX95 158 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 APOL6Q9BWW8 343 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 LRMDAQ9H2I8 198 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 NPHS2Q9NP85 383 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 MTMR10Q9NXD2 777 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.2□□□□□ -0.14
PTPN6-202ENST00000399448 GJD2Q9UKL4 321 aa14.2□□□□□ -0.14
PTPN6-202ENST00000399448 DCAF8L1A6NGE4 600 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 SLC15A5A6NIM6 579 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 ADCY6O43306 1168 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 METTL18O95568 372 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 F2P00734 622 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 YBX3P16989 372 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTPN6-202ENST00000399448 MAGEA3P43357 314 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 ATXN1P54253 815 aaKnown RBP14.19□□□□□ -0.14
PTPN6-202ENST00000399448 PARP6Q2NL67 630 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 XKR4Q5GH76 650 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 EFHC1Q5JVL4 640 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 STRADAQ7RTN6 431 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 NLRP9Q7RTR0 991 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 NPLOC4Q8TAT6 608 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 INPP5DQ92835 1189 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 APBB2Q92870 758 aa14.19□□□□□ -0.14
PTPN6-202ENST00000399448 QKIQ96PU8 341 aaKnown RBP eCLIP14.19□□□□□ -0.14
PTPN6-202ENST00000399448 CSPG4P5Q96PW8 444 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms