RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 MAGP20916 626 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 UGT1A1P22309 533 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 UGT1A4P22310 534 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 GRK2P25098 689 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 UGT1A3P35503 534 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 UGT1A5P35504 534 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 KPNA1P52294 538 aaPredicted RBP9.6□□□□□ -0.87
COL28A1-201ENST00000399429 TPTEP56180 551 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 ABCB5Q2M3G0 1257 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 TBCELQ5QJ74 424 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 SEL1L3Q68CR1 1132 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 DPY19L2Q6NUT2 758 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 TDRD5Q8NAT2 981 aaKnown RBP9.6□□□□□ -0.87
COL28A1-201ENST00000399429 CYP2W1Q8TAV3 490 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 SLC4A5Q9BY07 1137 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 CXorf21Q9HAI6 301 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 UGT1A7Q9HAW7 530 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 UGT1A10Q9HAW8 530 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 UGT1A8Q9HAW9 530 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 AAASQ9NRG9 546 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 PAK5Q9P286 719 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 DNAJB4Q9UDY4 337 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 TUBGCP4Q9UGJ1 667 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 SEPT9Q9UHD8 586 aaPredicted RBP9.6□□□□□ -0.87
COL28A1-201ENST00000399429 KAT6AQ92794 2004 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 TRIM64CA6NLI5 447 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 F8VP50 259 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 MAGEB2O15479 319 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 ATP9BO43861 1147 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 TCEA3O75764 348 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 CYP1A2P05177 515 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 ALAS1P13196 640 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 ZNF12P17014 697 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 ZNF24P17028 368 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 CCNA2P20248 432 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 GLRBP48167 497 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 CLK1P49759 484 aaKnown RBP9.6□□□□□ -0.87
COL28A1-201ENST00000399429 OXCT1P55809 520 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 YWHAEP62258 255 aaKnown RBP9.6□□□□□ -0.87
COL28A1-201ENST00000399429 LSM3P62310 102 aaKnown RBP9.6□□□□□ -0.87
COL28A1-201ENST00000399429 GNA12Q03113 381 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 FOXD4Q12950 439 aaPredicted RBP9.6□□□□□ -0.87
COL28A1-201ENST00000399429 BNIP3Q12983 259 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 MAPRE2Q15555 327 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 PLEKHG4Q58EX7 1191 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 FAM102AQ5T9C2 384 aaPredicted RBP9.6□□□□□ -0.87
COL28A1-201ENST00000399429 ADAMTS6Q9UKP5 1117 aa9.6□□□□□ -0.87
COL28A1-201ENST00000399429 GSTA4O15217 222 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 SRP72O76094 671 aaKnown RBP9.59□□□□□ -0.87
COL28A1-201ENST00000399429 ACTR2P61160 394 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 GABPAQ06546 454 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 MTX3Q5HYI7 312 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 TERB1Q8NA31 727 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 FAM156AQ8NDB6 213 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 ADCY4Q8NFM4 1077 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 FBXO27Q8NI29 283 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 C7orf43Q8WVR3 580 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 RSPH1Q8WYR4 309 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 RCN3Q96D15 328 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 MMP19Q99542 508 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 MSTO1Q9BUK6 570 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 SIX2Q9NPC8 291 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 ASNSD1Q9NWL6 643 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 BAG5Q9UL15 447 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 CARD8Q9Y2G2 431 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 MRPL11Q9Y3B7 192 aaKnown RBP9.59□□□□□ -0.87
COL28A1-201ENST00000399429 ARAP3Q8WWN8 1544 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 A0A0B4J269 797 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 TGFB1I1O43294 461 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 ZC3H11AO75152 810 aaKnown RBP eCLIP9.59□□□□□ -0.87
COL28A1-201ENST00000399429 GRAP2O75791 330 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 P4HA1P13674 534 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 NT5C2P49902 561 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 NME5P56597 212 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 TLR1Q15399 786 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 CYP1B1Q16678 543 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 ZBTB41Q5SVQ8 909 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 PAOXQ6QHF9 649 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 ATG14Q6ZNE5 492 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 IFNLR1Q8IU57 520 aaPredicted RBP9.59□□□□□ -0.87
COL28A1-201ENST00000399429 ALLCQ8N6M5 410 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 FNIP1Q8TF40 1166 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 ANKRD36BP1Q96IX9 119 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 CORO1BQ9BR76 489 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 TUFT1Q9NNX1 390 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 BTG4Q9NY30 223 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 TEKT2Q9UIF3 430 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 PTGES3LE9PB15 166 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 HLA-DRAP01903 254 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 HSPA1AP0DMV8 641 aaKnown RBP9.59□□□□□ -0.87
COL28A1-201ENST00000399429 HSPA1BP0DMV9 641 aaKnown RBP9.59□□□□□ -0.87
COL28A1-201ENST00000399429 PSMA4P25789 261 aaKnown RBP9.59□□□□□ -0.87
COL28A1-201ENST00000399429 GTF2H1P32780 548 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 STX5Q13190 355 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 SLC15A2Q16348 729 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 FAM182AQ5T1J6 154 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 SLC7A5P1Q8MH63 180 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 BANPQ8N9N5 519 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 FAM149B1Q96BN6 582 aa9.59□□□□□ -0.87
COL28A1-201ENST00000399429 PTCD3Q96EY7 689 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms