RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 APRTP07741 180 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 MMP3P08254 477 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 TAF1BQ53T94 588 aaPredicted RBP23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 PPP6R3Q5H9R7 873 aaPredicted RBP23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 SYCP2LQ5T4T6 812 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 TRIM42Q8IWZ5 723 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 CTAGE3PQ8IX95 158 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 SLC7A6OSQ96CW6 309 aaPredicted RBP23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 FAM111AQ96PZ2 611 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 MTO1Q9Y2Z2 717 aaKnown RBP23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 NME7Q9Y5B8 376 aa23.95■■□□□ 1.42
RABGGTA-202ENST00000399409 PLXNB2O15031 1838 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 TRIM49D1C9J1S8 452 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 SNAI1O95863 264 aaPredicted RBP23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 MAGEA3P43357 314 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 ACADSBP45954 432 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 RPL34P49207 117 aaKnown RBP23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 BCAT1P54687 386 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 PRKD1Q15139 912 aaPredicted RBP23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 LDLRAD1Q5T700 205 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 CATSPER4Q7RTX7 472 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 ANKRD52Q8NB46 1076 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 MTBPQ96DY7 904 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 C12orf65Q9H3J6 166 aaKnown RBP23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 PRDM16Q9HAZ2 1276 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 MKS1Q9NXB0 559 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 CNTN3Q9P232 1028 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 TUBGCP4Q9UGJ1 667 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 GTF2IRD1Q9UHL9 959 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 RPL26L1Q9UNX3 145 aaKnown RBP23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 A8MXQ7 604 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 ANP32DO95626 131 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 APOEP02649 317 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 NEFHP12036 1026 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 DGKDQ16760 1214 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 KIZQ2M2Z5 673 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 DUSP28Q4G0W2 176 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 C9orf57Q5W0N0 161 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 NOTUMQ6P988 496 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 CLNKQ7Z7G1 428 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 CRYBG2Q8N1P7 616 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 RFWD2Q8NHY2 731 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 CCDC110Q8TBZ0 833 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 PTPRN2Q92932 1015 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 QKIQ96PU8 341 aaKnown RBP eCLIP23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 L3MBTL1Q9Y468 752 aa23.94■■□□□ 1.42
RABGGTA-202ENST00000399409 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 PTPN4P29074 926 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 GCLCP48506 637 aaPredicted RBP23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 SOWAHAQ2M3V2 549 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 PLEKHG4Q58EX7 1191 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 FAXCQ5TGI0 409 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 MTDHQ86UE4 582 aaKnown RBP23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 B3GNT5Q9BYG0 378 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 DHX35Q9H5Z1 703 aaKnown RBP23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 XAB2Q9HCS7 855 aaKnown RBP23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 KANSL3Q9P2N6 904 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 UBQLN1Q9UMX0 589 aaKnown RBP23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 C15orf41Q9Y2V0 281 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 SLC45A1Q9Y2W3 748 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 SLC15A5A6NIM6 579 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 KRT38O76015 456 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 CCNFP41002 786 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 SERPINB4P48594 390 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 ARFIP2P53365 341 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 TLDC1Q6P9B6 456 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 ALKAL1Q6UXT8 129 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 TTC17Q96AE7 1141 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 SRPK1Q96SB4 655 aaKnown RBP23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 TLE6Q9H808 572 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 DCTN4Q9UJW0 460 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 AP4E1Q9UPM8 1137 aa23.93■■□□□ 1.42
RABGGTA-202ENST00000399409 SCN1AP35498 2009 aa23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 DNAJC6O75061 913 aa23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 CD4P01730 458 aa23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 OVGP1Q12889 678 aa23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 ZNF449Q6P9G9 518 aa23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 OR6J1Q8NGC5 347 aa23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 SLC10A4Q96EP9 437 aa23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 TSPAN18Q96SJ8 248 aa23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 MYCBPQ99417 103 aaPredicted RBP23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 CXCL16Q9H2A7 254 aa23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 ALG13Q9NP73 1137 aaKnown RBP23.92■■□□□ 1.42
RABGGTA-202ENST00000399409 SMPD1P17405 629 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 UNC5AQ6ZN44 842 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 GSDMBQ8TAX9 411 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 C18orf25Q96B23 403 aaPredicted RBP23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 HSFY1Q96LI6 401 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 EBNA1BP2Q99848 306 aaKnown RBP23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 TBC1D10AQ9BXI6 508 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 EIF2AQ9BY44 585 aaKnown RBP23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 HACD1B0YJ81 288 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 BGNP21810 368 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 SERPINB9P50453 376 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 SARNPP82979 210 aaKnown RBP23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 CTC1Q2NKJ3 1217 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 ACCSLQ4AC99 568 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 BZW1Q7L1Q6 419 aaKnown RBP23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 STRADAQ7RTN6 431 aa23.91■■□□□ 1.42
RABGGTA-202ENST00000399409 LONP2Q86WA8 852 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms