RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 ZNF341Q9BYN7 854 aa14.49□□□□□ -0.09
APOB-202ENST00000399256 ZNF277Q9NRM2 450 aaPredicted RBP14.49□□□□□ -0.09
APOB-202ENST00000399256 ZNF180Q9UJW8 692 aa14.49□□□□□ -0.09
APOB-202ENST00000399256 STYXL1Q9Y6J8 313 aa14.49□□□□□ -0.09
APOB-202ENST00000399256 hCG_2014768A0A024R1R8 64 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 K7ERI5 159 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 KCNN4O15554 427 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 ZMPSTE24O75844 475 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 ASS1P00966 412 aaKnown RBP14.48□□□□□ -0.09
APOB-202ENST00000399256 OSBPP22059 807 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 USP46P62068 366 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 FASTKD1Q53R41 847 aaKnown RBP14.48□□□□□ -0.09
APOB-202ENST00000399256 HPS6Q86YV9 775 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 DEPTORQ8TB45 409 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 MIS12Q9H081 205 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 THAP1Q9NVV9 213 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 MAD1L1Q9Y6D9 718 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 LOC100653049A0A140TA62 436 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 HMX2A2RU54 273 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 PDLIM1O00151 329 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 CHADO15335 359 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 CCNT2O60583 730 aaKnown RBP14.48□□□□□ -0.09
APOB-202ENST00000399256 KRT34O76011 436 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 KRT38O76015 456 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 APRTP07741 180 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 EIF4BP23588 611 aaKnown RBP14.48□□□□□ -0.09
APOB-202ENST00000399256 CHN2P52757 468 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 TTLL12Q14166 644 aaPredicted RBP14.48□□□□□ -0.09
APOB-202ENST00000399256 MAP7Q14244 749 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 EMC2Q15006 297 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 RAB6CQ53S08 254 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 RABGAP1LQ5R372 815 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 WDR75Q8IWA0 830 aaKnown RBP14.48□□□□□ -0.09
APOB-202ENST00000399256 ZNF518BQ9C0D4 1074 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 RAB6CQ9H0N0 254 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 CDH22Q9UJ99 828 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 C15orf38-AP3S2A0A0A6YYH1 394 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 HNRNPRO43390 633 aaKnown RBP14.48□□□□□ -0.09
APOB-202ENST00000399256 FOLH1Q04609 750 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 NOMO1Q15155 1222 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 ANKRD20A4Q4UJ75 823 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 UGT2A3Q6UWM9 527 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 UNC5AQ6ZN44 842 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 ARPINQ7Z6K5 226 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 ZBTB33Q86T24 672 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 CAND1Q86VP6 1230 aaKnown RBP14.48□□□□□ -0.09
APOB-202ENST00000399256 ADGRF2Q8IZF7 708 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 DEFB107AQ8IZN7 70 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 USP18Q9UMW8 372 aa14.48□□□□□ -0.09
APOB-202ENST00000399256 APOBEC2Q9Y235 224 aaKnown RBP14.48□□□□□ -0.09
APOB-202ENST00000399256 CCDC160A6NGH7 325 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 CAPN8A6NHC0 703 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 H0YCG3 227 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 SIN3BO75182 1162 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 APOEP02649 317 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 ASLP04424 464 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 KCNA4P22459 653 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 PRKCHP24723 683 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 CDH6P55285 790 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 DEUP1Q05D60 604 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 CDK18Q07002 472 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 SH3PXD2AQ5TCZ1 1133 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 SDCCAG8Q86SQ7 713 aaPredicted RBP14.47□□□□□ -0.09
APOB-202ENST00000399256 LCA5Q86VQ0 697 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 ICA1LQ8NDH6 482 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 PEBP4Q96S96 227 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 CPXM1Q96SM3 734 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 NIF3L1Q9GZT8 377 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.47□□□□□ -0.09
APOB-202ENST00000399256 GALNT8Q9NY28 637 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 POMPQ9Y244 141 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 TRUB2O95900 331 aaKnown RBP14.47□□□□□ -0.09
APOB-202ENST00000399256 CRHR1P34998 444 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 RAP1GAPP47736 663 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 VWA5B1Q5TIE3 1220 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 RBM44Q6ZP01 1051 aaKnown RBP14.47□□□□□ -0.09
APOB-202ENST00000399256 CMASQ8NFW8 434 aaPredicted RBP14.47□□□□□ -0.09
APOB-202ENST00000399256 PIWIL2Q8TC59 973 aaKnown RBP14.47□□□□□ -0.09
APOB-202ENST00000399256 TMEM39BQ9GZU3 492 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 PACSIN3Q9UKS6 424 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 TMCO1Q9UM00 188 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 SF3B1O75533 1304 aaKnown RBP eCLIP14.47□□□□□ -0.09
APOB-202ENST00000399256 SRCAPQ6ZRS2 3230 aa14.47□□□□□ -0.09
APOB-202ENST00000399256 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.46□□□□□ -0.09
APOB-202ENST00000399256 SMIM31A0A1B0GVY4 71 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 TTLL13PA6NNM8 815 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 LDHAP00338 332 aaKnown RBP14.46□□□□□ -0.09
APOB-202ENST00000399256 ERBB2P04626 1255 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 PSAPP07602 524 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 SMIM18P0DKX4 95 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 POLR2BP30876 1174 aaKnown RBP14.46□□□□□ -0.09
APOB-202ENST00000399256 CDH5P33151 784 aaPredicted RBP14.46□□□□□ -0.09
APOB-202ENST00000399256 WDR78Q5VTH9 848 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 SLFN12LQ6IEE8 588 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 MAVSQ7Z434 540 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 MPP5Q8N3R9 675 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 PNPOQ9NVS9 261 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 SLC17A6Q9P2U8 582 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 INPP5FQ9Y2H2 1132 aa14.46□□□□□ -0.09
APOB-202ENST00000399256 HEY1Q9Y5J3 304 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms