RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ANKRD20A12PQ8NF67 263 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 ATOH1Q92858 354 aaPredicted RBP14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 CDK5RAP1Q96SZ6 601 aaKnown RBP14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 P2RY13Q9BPV8 354 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 BPIFA3Q9BQP9 254 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 GANQ9H2C0 597 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 CHRDQ9H2X0 955 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PLCB1Q9NQ66 1216 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 MARCH2Q9P0N8 246 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TJP2Q9UDY2 1190 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SIK3Q9Y2K2 1263 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 LGALS16A8MUM7 142 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 EGFP01133 1207 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 KLKB1P03952 638 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 OPRD1P41143 372 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 MAGEA9P43362 315 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 RPL34P49207 117 aaKnown RBP14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 UBXN1Q04323 297 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 GOLGA8FQ08AF8 430 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 GOLGA8DPQ0D2H9 430 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 MESP2Q0VG99 397 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SYCP1Q15431 976 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TMEM25Q86YD3 366 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 EZH1Q92800 747 aaPredicted RBP14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 FAM122AQ96E09 287 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SLC4A5Q9BY07 1137 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 ABCC13Q9NSE7 274 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 C2orf42Q9NWW7 574 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SFMBT1Q9UHJ3 866 aa14.76□□□□□ -0.05
HLA-DQB1-202ENST00000399079 MYOFQ9NZM1 2061 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SLC12A8A0AV02 714 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 FAM170AA1A519 330 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 E5RJQ4 531 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 F8VZ95 297 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 LAMTOR5O43504 91 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PLA2G5P39877 138 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SLC6A11P48066 632 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 POLR2FP61218 127 aaKnown RBP14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 COG7P83436 770 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 GRSF1Q12849 480 aaKnown RBP eCLIP14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PDCLQ13371 301 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 LRRC32Q14392 662 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 IQCB1Q15051 598 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 MEA1Q16626 185 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 DGKKQ5KSL6 1271 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TSSK4Q6SA08 328 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 C12orf40Q86WS4 652 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 STK32AQ8WU08 396 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 RNF139Q8WU17 664 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 CD101Q93033 1021 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 OTUB2Q96DC9 234 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 CPXM1Q96SM3 734 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 STK33Q9BYT3 514 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 NLRC4Q9NPP4 1024 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SPHK2Q9NRA0 654 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 LSM7Q9UK45 103 aaKnown RBP14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PCDHGC3Q9UN70 934 aa14.75□□□□□ -0.05
HLA-DQB1-202ENST00000399079 ANTXRLA6NF34 631 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PAPSS1O43252 624 aaPredicted RBP14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 MSI1O43347 362 aaKnown RBP14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 ADH1CP00326 375 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 LTFP02788 710 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 ADH5P11766 374 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 CYP11B1P15538 503 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PTMSP20962 102 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 KRT9P35527 623 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 ANO4Q32M45 955 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PKN3Q6P5Z2 889 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 Q6ZNB5 142 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TPGS1Q6ZTW0 290 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TMEM110Q86TL2 294 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 FMNL3Q8IVF7 1028 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 NAT16Q8N8M0 369 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 C1orf131Q8NDD1 294 aaKnown RBP14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 IRGQQ8WZA9 623 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PIWIL1Q96J94 861 aaKnown RBP14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PCMTD1Q96MG8 357 aaPredicted RBP14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 STRIP2Q9ULQ0 834 aa14.74□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SMTNL1A8MU46 457 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TEX33O43247 280 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 GFPT2O94808 682 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 FBXO21O94952 628 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 FYNP06241 537 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SP9P0CG40 484 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 CORO1AP31146 461 aaKnown RBP14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 HOXC13P31276 330 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 ACADSBP45954 432 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SATB1Q01826 763 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 CSTF1Q05048 431 aaKnown RBP14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 ZSCAN23Q3MJ62 389 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 TAF3Q5VWG9 929 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 DENND1CQ8IV53 801 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 SFTPA1Q8IWL2 248 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 BHMTQ93088 406 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 FAM149B1Q96BN6 582 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 P2RY11Q96G91 374 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 PPP1R13BQ96KQ4 1090 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 LHX5Q9H2C1 402 aa14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 OLA1Q9NTK5 396 aaKnown RBP14.73□□□□□ -0.05
HLA-DQB1-202ENST00000399079 POLR3BQ9NW08 1133 aaPredicted RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms