RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 ZNF410Q86VK4 478 aa11.82□□□□□ -0.52
C4orf3-201ENST00000399075 CAND1Q86VP6 1230 aaKnown RBP11.82□□□□□ -0.52
C4orf3-201ENST00000399075 LRRC6Q86X45 466 aa11.82□□□□□ -0.52
C4orf3-201ENST00000399075 CFAP61Q8NHU2 1237 aa11.82□□□□□ -0.52
C4orf3-201ENST00000399075 SLC35F5Q8WV83 523 aa11.82□□□□□ -0.52
C4orf3-201ENST00000399075 PTPRN2Q92932 1015 aa11.82□□□□□ -0.52
C4orf3-201ENST00000399075 KHSRPQ92945 711 aaKnown RBP eCLIP11.82□□□□□ -0.52
C4orf3-201ENST00000399075 KIF12Q96FN5 646 aa11.82□□□□□ -0.52
C4orf3-201ENST00000399075 KLF6Q99612 283 aaPredicted RBP11.82□□□□□ -0.52
C4orf3-201ENST00000399075 SNRNP25Q9BV90 132 aaKnown RBP11.82□□□□□ -0.52
C4orf3-201ENST00000399075 TBC1D10AQ9BXI6 508 aa11.82□□□□□ -0.52
C4orf3-201ENST00000399075 SUDS3Q9H7L9 328 aaPredicted RBP11.82□□□□□ -0.52
C4orf3-201ENST00000399075 ETNK2Q9NVF9 386 aa11.82□□□□□ -0.52
C4orf3-201ENST00000399075 GTF2IRD1Q9UHL9 959 aa11.82□□□□□ -0.52
C4orf3-201ENST00000399075 VTNP04004 478 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 SNRPAP09012 282 aaKnown RBP11.81□□□□□ -0.52
C4orf3-201ENST00000399075 ZFXP17010 805 aaPredicted RBP11.81□□□□□ -0.52
C4orf3-201ENST00000399075 RBL1P28749 1068 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 PPP1R26Q5T8A7 1209 aaPredicted RBP11.81□□□□□ -0.52
C4orf3-201ENST00000399075 LGSNQ5TDP6 509 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 FAM91A1Q658Y4 838 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 ARHGAP17Q68EM7 881 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 APBB1IPQ7Z5R6 666 aaPredicted RBP11.81□□□□□ -0.52
C4orf3-201ENST00000399075 MTDHQ86UE4 582 aaKnown RBP11.81□□□□□ -0.52
C4orf3-201ENST00000399075 UNC93AQ86WB7 457 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 TTC30AQ86WT1 665 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 ZC3H7BQ9UGR2 993 aaKnown RBP11.81□□□□□ -0.52
C4orf3-201ENST00000399075 WDR91A4D1P6 747 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 GCATO75600 419 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 PYGBP11216 843 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 TPSB2P20231 275 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 MTM1Q13496 603 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 TPSAB1Q15661 275 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 DPYSL2Q16555 572 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 MAMDC4Q6UXC1 1216 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 TRIM42Q8IWZ5 723 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 LRRC52Q8N7C0 313 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 MAB21L3Q8N8X9 362 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 C12orf29Q8N999 325 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 FAM13CQ8NE31 585 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 RFWD2Q8NHY2 731 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 GTF3C2Q8WUA4 911 aaPredicted RBP11.81□□□□□ -0.52
C4orf3-201ENST00000399075 NLRP7Q8WX94 980 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 MTBPQ96DY7 904 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 FAM111AQ96PZ2 611 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 C11orf84Q9BUA3 381 aaPredicted RBP11.81□□□□□ -0.52
C4orf3-201ENST00000399075 RNPEPL1Q9HAU8 725 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 NGRNQ9NPE2 291 aaKnown RBP11.81□□□□□ -0.52
C4orf3-201ENST00000399075 SPATS2LQ9NUQ6 558 aaKnown RBP11.81□□□□□ -0.52
C4orf3-201ENST00000399075 HESX1Q9UBX0 185 aa11.81□□□□□ -0.52
C4orf3-201ENST00000399075 GRAP2O75791 330 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 CBX6O95503 412 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 SERPINB4P48594 390 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 NR2C2P49116 596 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 RGS7P49802 495 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 PRPF39Q86UA1 669 aaKnown RBP11.8□□□□□ -0.52
C4orf3-201ENST00000399075 CENPIQ92674 756 aaPredicted RBP11.8□□□□□ -0.52
C4orf3-201ENST00000399075 SKA1Q96BD8 255 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 CFAP36Q96G28 342 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 SH3GL3Q99963 347 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 C16orf70Q9BSU1 422 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 TSPYL2Q9H2G4 693 aaPredicted RBP11.8□□□□□ -0.52
C4orf3-201ENST00000399075 NRDE2Q9H7Z3 1164 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 PLAC1Q9HBJ0 212 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 ENO4A6NNW6 628 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 COPEO14579 308 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 PAPSS1O43252 624 aaPredicted RBP11.8□□□□□ -0.52
C4orf3-201ENST00000399075 AVILO75366 819 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 HDAC4P56524 1084 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 CDK16Q00536 496 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 KRT72Q14CN4 511 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 ZNF792Q3KQV3 632 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 SCYL2Q6P3W7 929 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 ZNF449Q6P9G9 518 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 LONP2Q86WA8 852 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 ENDOVQ8N8Q3 282 aaKnown RBP11.8□□□□□ -0.52
C4orf3-201ENST00000399075 FBXO41Q8TF61 875 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 SRPK1Q96SB4 655 aaKnown RBP11.8□□□□□ -0.52
C4orf3-201ENST00000399075 MRPL45Q9BRJ2 306 aaKnown RBP11.8□□□□□ -0.52
C4orf3-201ENST00000399075 C12orf65Q9H3J6 166 aaKnown RBP11.8□□□□□ -0.52
C4orf3-201ENST00000399075 KCNK13Q9HB14 408 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 GPATCH2LQ9NWQ4 482 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 HEY1Q9Y5J3 304 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 SBF1O95248 1867 aa11.8□□□□□ -0.52
C4orf3-201ENST00000399075 SLC15A5A6NIM6 579 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 TRIM49D1C9J1S8 452 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 PIK3R2O00459 728 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 PEX11AO75192 247 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 HAUS5O94927 633 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 APOEP02649 317 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 DLDP09622 509 aaKnown RBP11.79□□□□□ -0.52
C4orf3-201ENST00000399075 RPL34P49207 117 aaKnown RBP11.79□□□□□ -0.52
C4orf3-201ENST00000399075 ARFIP2P53365 341 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 CDK18Q07002 472 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 CA9Q16790 459 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 CYS1Q717R9 158 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 SLC26A9Q7LBE3 791 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 VPS52Q8N1B4 723 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 RAB3IL1Q8TBN0 382 aa11.79□□□□□ -0.52
C4orf3-201ENST00000399075 PTCD3Q96EY7 689 aaKnown RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms