RNA–Protein interactions for RNA: ENST00000398043.2

APTR-201, Transcript of Alu-mediated CDKN1A/p21 transcriptional regulator, humanhuman

TSL 1 (best)

Gene APTR, Length 528 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTR-201ENST00000398043 C12orf40Q86WS4 652 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 ETFBKMTQ8IXQ9 262 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 FAM71AQ8IYT1 594 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 PHTF2Q8N3S3 785 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 CLEC4CQ8WTT0 213 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 STK32AQ8WU08 396 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 IRGQQ8WZA9 623 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 SLC4A5Q9BY07 1137 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 FHOD1Q9Y613 1164 aa17.51■□□□□ 0.39
APTR-201ENST00000398043 PTPRZ1P23471 2315 aaPredicted RBP17.5■□□□□ 0.39
APTR-201ENST00000398043 A0A0A0MRY4 1105 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 HOXC11O43248 304 aaPredicted RBP17.5■□□□□ 0.39
APTR-201ENST00000398043 THAP12O43422 761 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 LCP1P13796 627 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 EIF2DP41214 584 aaKnown RBP17.5■□□□□ 0.39
APTR-201ENST00000398043 SATB1Q01826 763 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 CSTF1Q05048 431 aaKnown RBP17.5■□□□□ 0.39
APTR-201ENST00000398043 CAVIN1Q6NZI2 390 aaKnown RBP17.5■□□□□ 0.39
APTR-201ENST00000398043 TSSK4Q6SA08 328 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 TMEM25Q86YD3 366 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 MIB1Q86YT6 1006 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 SIX6OS1Q8N1H7 587 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 WDTC1Q8N5D0 677 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 ZBTB44Q8NCP5 570 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 P2RY11Q96G91 374 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 FUCA2Q9BTY2 467 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 PLCB1Q9NQ66 1216 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 SPHK2Q9NRA0 654 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 MARCH2Q9P0N8 246 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 LIMA1Q9UHB6 759 aaKnown RBP17.5■□□□□ 0.39
APTR-201ENST00000398043 PCDHGC3Q9UN70 934 aa17.5■□□□□ 0.39
APTR-201ENST00000398043 RALGAPA1Q6GYQ0 2036 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 GPR179Q6PRD1 2367 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 ANTXRLA6NF34 631 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 CHURC1-FNTBB4DL54 471 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 K7EQS6 105 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 K7ESF4 209 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 PIK3R2O00459 728 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 MED7O43513 233 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 ADH1CP00326 375 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 FYNP06241 537 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 PNMA6AP0CW24 399 aaPredicted RBP17.49■□□□□ 0.39
APTR-201ENST00000398043 ADH5P11766 374 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 UCHL3P15374 230 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 CXCL12P48061 93 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 SLC6A11P48066 632 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 MRE11P49959 708 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 CCR3P51677 355 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 COG7P83436 770 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 EFEMP1Q12805 493 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 BTBD8Q5XKL5 378 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 MSANTD2Q6P1R3 559 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 TMEM110Q86TL2 294 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 VPS16Q9H269 839 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 GANQ9H2C0 597 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 ABCC13Q9NSE7 274 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 OLA1Q9NTK5 396 aaKnown RBP17.49■□□□□ 0.39
APTR-201ENST00000398043 MARK1Q9P0L2 795 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 RASAL2Q9UJF2 1139 aa17.49■□□□□ 0.39
APTR-201ENST00000398043 EP300Q09472 2414 aaPredicted RBP17.48■□□□□ 0.39
APTR-201ENST00000398043 LILRB5O75023 590 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 RNF40O75150 1001 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 FBXO21O94952 628 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 HOXC13P31276 330 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 USP8P40818 1118 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 COPB1P53618 953 aaKnown RBP17.48■□□□□ 0.39
APTR-201ENST00000398043 GAD2Q05329 585 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 GOLGA8FQ08AF8 430 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 GOLGA8DPQ0D2H9 430 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 DRAP1Q14919 205 aaPredicted RBP17.48■□□□□ 0.39
APTR-201ENST00000398043 TRIP4Q15650 581 aaPredicted RBP17.48■□□□□ 0.39
APTR-201ENST00000398043 KLHL40Q2TBA0 621 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 FBXO43Q4G163 708 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 ALYREFQ86V81 257 aaKnown RBP17.48■□□□□ 0.39
APTR-201ENST00000398043 SLC47A2Q86VL8 602 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 SFTPA1Q8IWL2 248 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 FAM217AQ8IXS0 508 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 EDEM1Q92611 657 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 BPIFA3Q9BQP9 254 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 LSM14BQ9BX40 385 aaKnown RBP17.48■□□□□ 0.39
APTR-201ENST00000398043 LHX5Q9H2C1 402 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 LSM7Q9UK45 103 aaKnown RBP17.48■□□□□ 0.39
APTR-201ENST00000398043 SIK3Q9Y2K2 1263 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 R4GN57 208 aa17.48■□□□□ 0.39
APTR-201ENST00000398043 PAPSS1O43252 624 aaPredicted RBP17.47■□□□□ 0.39
APTR-201ENST00000398043 IGLV3-27P01718 113 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 LTFP02788 710 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 HOXA6P31267 233 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 ACADSBP45954 432 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 KLK7P49862 253 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 PTK2Q05397 1052 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 ANO6Q4KMQ2 910 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 RSRC2Q7L4I2 434 aaKnown RBP17.47■□□□□ 0.39
APTR-201ENST00000398043 SCUBE3Q8IX30 993 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 EXOC4Q96A65 974 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 FAM126AQ9BYI3 521 aaPredicted RBP17.47■□□□□ 0.39
APTR-201ENST00000398043 ZSCAN32Q9NX65 697 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 TJP2Q9UDY2 1190 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 SFMBT1Q9UHJ3 866 aa17.47■□□□□ 0.39
APTR-201ENST00000398043 AGO1Q9UL18 857 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms