RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 GOLGA8SH3BPF8 625 aa26.54■■□□□ 1.84
TMEM55B-202ENST00000398020 DDX3XO00571 662 aaKnown RBP eCLIP26.54■■□□□ 1.842e-8■■□□□ 14.3
TMEM55B-202ENST00000398020 DCXO43602 365 aa26.54■■□□□ 1.84
TMEM55B-202ENST00000398020 HMBSP08397 361 aa26.54■■□□□ 1.84
TMEM55B-202ENST00000398020 SRFP11831 508 aa26.54■■□□□ 1.84
TMEM55B-202ENST00000398020 SYPL2Q5VXT5 272 aa26.54■■□□□ 1.84
TMEM55B-202ENST00000398020 TOGARAM2Q6ZUX3 1019 aa26.54■■□□□ 1.84
TMEM55B-202ENST00000398020 DNAAF5Q86Y56 855 aa26.54■■□□□ 1.84
TMEM55B-202ENST00000398020 ASIC4Q96FT7 647 aa26.54■■□□□ 1.84
TMEM55B-202ENST00000398020 CAPN9O14815 690 aa26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 ZNF263O14978 683 aa26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 ADCY5O95622 1261 aa26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 FAM102AQ5T9C2 384 aaPredicted RBP26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 TRIM68Q6AZZ1 485 aa26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 WDR59Q6PJI9 974 aa26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 POPDC2Q9HBU9 364 aa26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 OLA1Q9NTK5 396 aaKnown RBP26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 THG1LQ9NWX6 298 aaKnown RBP26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 ADAM22Q9P0K1 906 aa26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 ARHGAP20Q9P2F6 1191 aa26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 BZW2Q9Y6E2 419 aaKnown RBP26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 WNT6Q9Y6F9 365 aa26.53■■□□□ 1.84
TMEM55B-202ENST00000398020 AKR1B15C9JRZ8 316 aaPredicted RBP26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 MSI1O43347 362 aaKnown RBP26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 HNRNPH3P31942 346 aaKnown RBP26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 RNASE9P60153 205 aaKnown RBP26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 ZXDAP98168 799 aa26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 PTP4A2Q12974 167 aa26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 EFHC1Q5JVL4 640 aa26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 CC2D1AQ6P1N0 951 aaPredicted RBP26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 ZDHHC17Q8IUH5 632 aa26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 ADAM32Q8TC27 787 aa26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 ADAMTS1Q9UHI8 967 aa26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 STRIP2Q9ULQ0 834 aa26.52■■□□□ 1.84
TMEM55B-202ENST00000398020 SLC12A8A0AV02 714 aa26.51■■□□□ 1.83
TMEM55B-202ENST00000398020 TNK2Q07912 1038 aa26.51■■□□□ 1.83
TMEM55B-202ENST00000398020 ACAD10Q6JQN1 1059 aa26.51■■□□□ 1.83
TMEM55B-202ENST00000398020 SLC26A9Q7LBE3 791 aa26.51■■□□□ 1.83
TMEM55B-202ENST00000398020 PHF13Q86YI8 300 aaPredicted RBP26.51■■□□□ 1.83
TMEM55B-202ENST00000398020 UBALD2Q8IYN6 164 aa26.51■■□□□ 1.83
TMEM55B-202ENST00000398020 SH3BP1Q9Y3L3 701 aa26.51■■□□□ 1.83
TMEM55B-202ENST00000398020 CHADO15335 359 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 HSF2BPO75031 334 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 TCF3P15923 654 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 ARID5BQ14865 1188 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 ARHGAP29Q52LW3 1261 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 DCAF6Q58WW2 860 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 IER5LQ5T953 404 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 MON1BQ7L1V2 547 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 DDX42Q86XP3 938 aaKnown RBP eCLIP26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 CNGA4Q8IV77 575 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 DRC7Q8IY82 874 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 DEFB106AQ8N104 65 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 TTC8Q8TAM2 541 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 DQX1Q8TE96 717 aaKnown RBP26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 LINC00597Q9H2U6 94 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 ZNHIT6Q9NWK9 470 aaKnown RBP26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 PITX1P78337 314 aaPredicted RBP26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 TSR1Q2NL82 804 aaKnown RBP26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 EDAQ92838 391 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 IRF7Q92985 503 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 EBF3Q9H4W6 596 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 SLC2A4RGQ9NR83 387 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 ASNSD1Q9NWL6 643 aa26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 DUS2Q9NX74 493 aaKnown RBP26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 KIF26AQ9ULI4 1882 aaPredicted RBP26.5■■□□□ 1.83
TMEM55B-202ENST00000398020 GJB6O95452 261 aa26.49■■□□□ 1.83
TMEM55B-202ENST00000398020 GLI1P08151 1106 aa26.49■■□□□ 1.83
TMEM55B-202ENST00000398020 MSANTD2Q6P1R3 559 aa26.49■■□□□ 1.83
TMEM55B-202ENST00000398020 TC2NQ8N9U0 490 aa26.49■■□□□ 1.83
TMEM55B-202ENST00000398020 SLC2A13Q96QE2 648 aa26.49■■□□□ 1.83
TMEM55B-202ENST00000398020 FAM83CQ9BQN1 747 aa26.49■■□□□ 1.83
TMEM55B-202ENST00000398020 TRIM62Q9BVG3 475 aa26.49■■□□□ 1.83
TMEM55B-202ENST00000398020 GTSE1Q9NYZ3 720 aa26.49■■□□□ 1.83
TMEM55B-202ENST00000398020 TICRRQ7Z2Z1 1910 aa26.49■■□□□ 1.83
TMEM55B-202ENST00000398020 ARNTLO00327 626 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 STC2O76061 302 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 CALB1P05937 261 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 ALADP13716 330 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 ARSAP15289 507 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 EIF4A3P38919 411 aaKnown RBP26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 COG7P83436 770 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 VPS36Q86VN1 386 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 MCOLN2Q8IZK6 566 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 OSCP1Q8WVF1 389 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 CHP1Q99653 195 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 METTL5Q9NRN9 209 aaKnown RBP26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 FBXL21Q9UKT6 434 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 CA14Q9ULX7 337 aa26.48■■□□□ 1.83
TMEM55B-202ENST00000398020 A0A087X0T9 212 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 E2F8A0AVK6 867 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 PI4K2BG5E9Z4 385 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 GREM1O60565 184 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 DAB1O75553 588 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 FAM228BP0C875 321 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 IFNAR2P48551 515 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 C1QBPQ07021 282 aaKnown RBP26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 BEND5Q7L4P6 421 aa26.47■■□□□ 1.83
TMEM55B-202ENST00000398020 TAC4Q86UU9 113 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms