RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 CDO1Q16878 200 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 KLHDC10Q6PID8 442 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 RSRC2Q7L4I2 434 aaKnown RBP19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 KCTD6Q8NC69 237 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 STKLD1Q8NE28 680 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 POF1BQ8WVV4 589 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 ZNF670Q9BS34 389 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 OSBPL8Q9BZF1 889 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 SLITRK6Q9H5Y7 841 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 SLC27A5Q9Y2P5 690 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 YIPF1Q9Y548 306 aa19.82■□□□□ 0.76
TSPAN4-204ENST00000397404 LCHNA4D1U4 455 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 IGLV3-25P01717 112 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 RARAP10276 462 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 RPL17P18621 184 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 KDELR1P24390 212 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 TFDP2Q14188 446 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 TAF12Q16514 161 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 PABPC1LQ4VXU2 614 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 C9orf50Q5SZB4 431 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 MAATS1Q7Z4T9 603 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 GPR161Q8N6U8 529 aaKnown RBP19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 CCDC26Q8TAB7 109 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 SLC7A14Q8TBB6 771 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 KLHL5Q96PQ7 755 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 PLEKHA4Q9H4M7 779 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 NAALADL1Q9UQQ1 740 aa19.81■□□□□ 0.76
TSPAN4-204ENST00000397404 LRRD1A4D1F6 860 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 H3BNC9 293 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 PDE2AO00408 941 aaPredicted RBP19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 FGF19O95750 216 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 GLUD1P00367 558 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 CNPP09543 421 aaKnown RBP19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 ZFXP17010 805 aaPredicted RBP19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 ATF6P18850 670 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 DNAJB2P25686 324 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 IL1R2P27930 398 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 CHRNA3P32297 505 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 PPP2R5DQ14738 602 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 EFHC2Q5JST6 749 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 SCYL2Q6P3W7 929 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 LILRA6Q6PI73 481 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 SPOCD1Q6ZMY3 1216 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 ELMOD1Q8N336 334 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 C12orf50Q8NA57 414 aaPredicted RBP19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 MS4A14Q96JA4 679 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 CRISPLD1Q9H336 500 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 FAM204AQ9H8W3 233 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 ZWILCHQ9H900 591 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 PCSK1NQ9UHG2 260 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 FBXW11Q9UKB1 542 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 INSL5Q9Y5Q6 135 aa19.8■□□□□ 0.76
TSPAN4-204ENST00000397404 TARSL2A2RTX5 802 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 C2orf71A6NGG8 1288 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 PFKLP17858 780 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 KLRC2P26717 231 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 HOXA9P31269 272 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 CDKN2BP42772 138 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 FNTAP49354 379 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 CXCR3P49682 368 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 LMNB2Q03252 620 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 EIF4EBP2Q13542 120 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 KRT81Q14533 505 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 CYP1B1Q16678 543 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 SYPL2Q5VXT5 272 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 HFE2Q6ZVN8 426 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 DQX1Q8TE96 717 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 PSMG2Q969U7 264 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 MAK16Q9BXY0 300 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 DDIT4Q9NX09 232 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 GREB1Q4ZG55 1949 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 hCG_1818297A0A087WSY0 165 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 CA3P07451 260 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 POU2F2P09086 479 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 CCR1P32246 355 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 TAF10Q12962 218 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 KLF1Q13351 362 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 ZNF211Q13398 564 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 DHX34Q14147 1143 aaKnown RBP19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 SCD5Q86SK9 330 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 TTC9BQ8N6N2 239 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 C17orf80Q9BSJ5 609 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 WDCPQ9H6R7 721 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 LRRC19Q9H756 370 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 MTPAPQ9NVV4 582 aaKnown RBP eCLIP19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.79■□□□□ 0.765e-7■■■■□ 26.6
TSPAN4-204ENST00000397404 TRPM5Q9NZQ8 1165 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 FZD10Q9ULW2 581 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 AP4E1Q9UPM8 1137 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 TLR6Q9Y2C9 796 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 PLXNA4Q9HCM2 1894 aa19.79■□□□□ 0.76
TSPAN4-204ENST00000397404 CLUHO75153 1309 aa19.78■□□□□ 0.76
TSPAN4-204ENST00000397404 MYO16Q9Y6X6 1858 aa19.78■□□□□ 0.76
TSPAN4-204ENST00000397404 A0A1W2PQH9 124 aa19.78■□□□□ 0.76
TSPAN4-204ENST00000397404 SOBPA7XYQ1 873 aa19.78■□□□□ 0.76
TSPAN4-204ENST00000397404 IRAK2O43187 625 aa19.78■□□□□ 0.76
TSPAN4-204ENST00000397404 TGM5O43548 720 aa19.78■□□□□ 0.76
TSPAN4-204ENST00000397404 SEC24AO95486 1093 aa19.78■□□□□ 0.76
TSPAN4-204ENST00000397404 LRG1P02750 347 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms