RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 CDK4P11802 303 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 CD19P15391 556 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 PEX2P28328 305 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ZNF132P52740 706 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 FKBP1AP62942 108 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 MRPS5P82675 430 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 FAXCQ5TGI0 409 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ANGEL2Q5VTE6 544 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 CES4AQ5XG92 561 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 AAGABQ6PD74 315 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 KLHDC10Q6PID8 442 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 NPNTQ6UXI9 565 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 PDSS2Q86YH6 399 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 NDUFAF2Q8N183 169 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 DEPTORQ8TB45 409 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 TMEM143Q96AN5 459 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 PDCD2LQ9BRP1 358 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 HAPLN2Q9GZV7 340 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 MIS12Q9H081 205 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 LIN28AQ9H9Z2 209 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 CISHQ9NSE2 258 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 SIRPGQ9P1W8 387 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 DOLKQ9UPQ8 538 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 LTBP1Q14766 1721 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 K7ERI5 159 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 UGT1A9O60656 530 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 PDE5AO76074 875 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 CST3P01034 146 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ALOX15P16050 662 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ZNF24P17028 368 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 POLR2BP30876 1174 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 SERPINB6P35237 376 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 PSMC1P62191 440 aaKnown RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 IGBP1P78318 339 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 TAF5Q15542 800 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 MMEL1Q495T6 779 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 SLC44A4Q53GD3 710 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 TEX44Q53QW1 395 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 MROH9Q5TGP6 573 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 NCCRP1Q6ZVX7 275 aaPredicted RBP9.5□□□□□ -0.89
CAPN3-206ENST00000397163 WDTC1Q8N5D0 677 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ARFGAP1Q8N6T3 406 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 TFAP2BQ92481 460 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 SHCBP1LQ9BZQ2 653 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 ZNF518BQ9C0D4 1074 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 KLHL4Q9C0H6 718 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 C20orf27Q9GZN8 174 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 UGT1A7Q9HAW7 530 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 UGT1A10Q9HAW8 530 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 UGT1A8Q9HAW9 530 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 CYP4F11Q9HBI6 524 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 USP29Q9HBJ7 922 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 CYP26B1Q9NR63 512 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 TJP2Q9UDY2 1190 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 TTLL3Q9Y4R7 772 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 GMEB1Q9Y692 573 aa9.5□□□□□ -0.89
CAPN3-206ENST00000397163 VILLO15195 856 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 DKC1O60832 514 aaKnown RBP eCLIP9.49□□□□□ -0.89
CAPN3-206ENST00000397163 KRT38O76015 456 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 LDHAP00338 332 aaKnown RBP9.49□□□□□ -0.89
CAPN3-206ENST00000397163 TFPTP0C1Z6 253 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 UQCRBP14927 111 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 MLH1P40692 756 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 PSMD7P51665 324 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 PRKCEQ02156 737 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 TRIP10Q15642 601 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 RALGPS1Q5JS13 557 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 SLFN12LQ6IEE8 588 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 FBXL19Q6PCT2 694 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 WDR75Q8IWA0 830 aaKnown RBP9.49□□□□□ -0.89
CAPN3-206ENST00000397163 KIAA0319LQ8IZA0 1049 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 GDPD5Q8WTR4 605 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 GCNAQ96QF7 691 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 SLX1AQ9BQ83 275 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 ZNF341Q9BYN7 854 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 C1orf21Q9H246 121 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 FBXO40Q9UH90 709 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 APPL1Q9UKG1 709 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 TMEM221A6NGB7 291 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 SPDYE2BA6NHP3 402 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 RFPL1O75677 317 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 BPGMP07738 259 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 SPDYE6P0CI01 402 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 VCLP18206 1134 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 MYL6P60660 151 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 YWHAZP63104 245 aaKnown RBP9.49□□□□□ -0.89
CAPN3-206ENST00000397163 MSLNQ13421 630 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-206ENST00000397163 HNRNPDQ14103 355 aaKnown RBP9.49□□□□□ -0.89
CAPN3-206ENST00000397163 KCNJ11Q14654 390 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 SPDYE2Q495Y8 402 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 PTPN20Q4JDL3 420 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 DENND1BQ6P3S1 775 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 C1orf228Q6PIY5 440 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 DENND5BQ6ZUT9 1274 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 RDM1Q8NG50 284 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.49□□□□□ -0.89
CAPN3-206ENST00000397163 SLC35B4Q969S0 331 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 CATSPER2Q96P56 530 aa9.49□□□□□ -0.89
CAPN3-206ENST00000397163 XAB2Q9HCS7 855 aaKnown RBP9.49□□□□□ -0.89
CAPN3-206ENST00000397163 SH3GLB1Q9Y371 365 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms