RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 MYOFQ9NZM1 2061 aa15.28■□□□□ 0.04
SEC13-208ENST00000397109 TULP2O00295 520 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 MED7O43513 233 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 EGFP01133 1207 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 ADH5P11766 374 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 SLC9A1P19634 815 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 BRD2P25440 801 aaKnown RBP15.27■□□□□ 0.04
SEC13-208ENST00000397109 EIF2DP41214 584 aaKnown RBP15.27■□□□□ 0.04
SEC13-208ENST00000397109 GSDMDP57764 484 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 YWHAGP61981 247 aaKnown RBP eCLIP15.27■□□□□ 0.04
SEC13-208ENST00000397109 COG7P83436 770 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 GAD2Q05329 585 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 VWA3BQ502W6 1294 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 RHBDF2Q6PJF5 856 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 Q6ZS52 159 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 RSRC2Q7L4I2 434 aaKnown RBP15.27■□□□□ 0.04
SEC13-208ENST00000397109 APTXQ7Z2E3 356 aaKnown RBP15.27■□□□□ 0.04
SEC13-208ENST00000397109 SIX6OS1Q8N1H7 587 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 ZBTB44Q8NCP5 570 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 SLC35F5Q8WV83 523 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 HSFY1Q96LI6 401 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 TUBGCP2Q9BSJ2 902 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 NDST4Q9H3R1 872 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 FBRSL1Q9HCM7 1045 aaKnown RBP15.27■□□□□ 0.04
SEC13-208ENST00000397109 CNGB3Q9NQW8 809 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 OLA1Q9NTK5 396 aaKnown RBP15.27■□□□□ 0.04
SEC13-208ENST00000397109 LIMA1Q9UHB6 759 aaKnown RBP15.27■□□□□ 0.04
SEC13-208ENST00000397109 STRIP2Q9ULQ0 834 aa15.27■□□□□ 0.04
SEC13-208ENST00000397109 PRR23AA6NEV1 266 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.27■□□□□ 0.03
SEC13-208ENST00000397109 CHURC1-FNTBB4DL54 471 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 M0QYV0 167 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 SCAMP3O14828 347 aaKnown RBP15.27■□□□□ 0.03
SEC13-208ENST00000397109 LMNAP02545 664 aaKnown RBP15.27■□□□□ 0.03
SEC13-208ENST00000397109 PON1P27169 355 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 HOXA6P31267 233 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 OPRD1P41143 372 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 SATB1Q01826 763 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 ADIGQ0VDE8 80 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 MEA1Q16626 185 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 GAB4Q2WGN9 574 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 PREPLQ4J6C6 727 aaPredicted RBP15.27■□□□□ 0.03
SEC13-208ENST00000397109 LY6G5CQ5SRR4 150 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 BTBD8Q5XKL5 378 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 TSSK4Q6SA08 328 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 BBS7Q8IWZ6 715 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 DCLK3Q9C098 648 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 SPHK2Q9NRA0 654 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 NUDT5Q9UKK9 219 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 ZNF510Q9Y2H8 683 aa15.27■□□□□ 0.03
SEC13-208ENST00000397109 MDM4O15151 490 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 HOXC11O43248 304 aaPredicted RBP15.26■□□□□ 0.03
SEC13-208ENST00000397109 RNF40O75150 1001 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 TDGF1P13385 188 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 ATP1A3P13637 1013 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 KRT31Q15323 416 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 HSP90AA4PQ58FG1 418 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 MIIPQ5JXC2 388 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 NAIF1Q69YI7 327 aaPredicted RBP15.26■□□□□ 0.03
SEC13-208ENST00000397109 ASCL5Q7RTU5 278 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 MIB1Q86YT6 1006 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 ANKRD20A12PQ8NF67 263 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 RNF139Q8WU17 664 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 IRGQQ8WZA9 623 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 SECISBP2LQ93073 1101 aaKnown RBP15.26■□□□□ 0.03
SEC13-208ENST00000397109 WBP2Q969T9 261 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 PNKPQ96T60 521 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 ZSWIM1Q9BR11 485 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 MARCH2Q9P0N8 246 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 RASAL2Q9UJF2 1139 aa15.26■□□□□ 0.03
SEC13-208ENST00000397109 GREM1O60565 184 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 LILRB5O75023 590 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 STC2O76061 302 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 FBXO21O94952 628 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 LCP1P13796 627 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 ACADSBP45954 432 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 FANCCQ00597 558 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 EFEMP1Q12805 493 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 ARHGAP44Q17R89 818 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 PMF1Q6P1K2 205 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 SHC3Q92529 594 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 ACDQ96AP0 544 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 ABCC13Q9NSE7 274 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.25■□□□□ 0.03
SEC13-208ENST00000397109 WDR35Q9P2L0 1181 aa15.25■□□□□ 0.03
SEC13-208ENST00000397109 K7ESF4 209 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 PES1O00541 588 aaKnown RBP15.24■□□□□ 0.03
SEC13-208ENST00000397109 THAP12O43422 761 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 APODP05090 189 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 TPM2P07951 284 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 GNA15P30679 374 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 USP8P40818 1118 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 RGS7P49802 495 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 UBASH3AP57075 661 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 DAOAP59103 153 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 ANO4Q32M45 955 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 BSPRYQ5W0U4 402 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 GJB7Q6PEY0 223 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 Q6ZNB5 142 aa15.24■□□□□ 0.03
SEC13-208ENST00000397109 NUDT18Q6ZVK8 323 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms