RNA–Protein interactions for RNA: ENST00000396832.5

CSNK1E-203, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-203ENST00000396832 GRAP2O75791 330 aa24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 FOLH1Q04609 750 aa24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 FSTL1Q12841 308 aa24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 DARS2Q6PI48 645 aaKnown RBP24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 NUDCD3Q8IVD9 361 aa24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 PIP4K2CQ8TBX8 421 aa24.87■■□□□ 1.57
CSNK1E-203ENST00000396832 C15orf38-AP3S2A0A0A6YYH1 394 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 TSHRP16473 764 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 PTPN7P35236 360 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 HPCAP84074 193 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 B3GNT6Q6ZMB0 384 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 ARPINQ7Z6K5 226 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 DDX56Q9NY93 547 aaKnown RBP24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 CCDC160A6NGH7 325 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 COQ9O75208 318 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 PDE5AO76074 875 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 SMIM18P0DKX4 95 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 SERPINB6P35237 376 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 ZNF132P52740 706 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 EN1Q05925 392 aaPredicted RBP24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 DPYSL3Q14195 570 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 CPXM1Q96SM3 734 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 SHCBP1LQ9BZQ2 653 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 DDX18Q9NVP1 670 aaKnown RBP24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 CIDEBQ9UHD4 219 aa24.86■■□□□ 1.57
CSNK1E-203ENST00000396832 MAGEA8P43361 318 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 TEX44Q53QW1 395 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 POU5F2Q8N7G0 328 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 AKT1S1Q96B36 256 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 CCDC124Q96CT7 223 aaKnown RBP24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 HBS1LQ9Y450 684 aaKnown RBP24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 A0A0B4J269 797 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 EGFRP00533 1210 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 ASS1P00966 412 aaKnown RBP24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 CCDC166P0CW27 439 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 DESP17661 470 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 AOC1P19801 751 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 TGFB2P61812 414 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 TTC39BQ5VTQ0 682 aaPredicted RBP24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 ISLR2Q6UXK2 745 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 ICA1LQ8NDH6 482 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 FAF2Q96CS3 445 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 SIRPGQ9P1W8 387 aa24.85■■□□□ 1.57
CSNK1E-203ENST00000396832 SDR42E2A6NKP2 422 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 MCF2LO15068 1137 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 AP1G1O43747 822 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 CCNT2O60583 730 aaKnown RBP24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 SETSIPP0DME0 302 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 RPL5P46777 297 aaKnown RBP24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 MRPS5P82675 430 aaKnown RBP24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 TRPC3Q13507 836 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 THNSL1Q8IYQ7 743 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 GCNAQ96QF7 691 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 H7C0C1 242 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 VWA5AO00534 786 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 TFAP2AP05549 437 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 SRGAP2CP0DJJ0 459 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 ATP5OP48047 213 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 GRAMD1BQ3KR37 738 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 KLHDC10Q6PID8 442 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 TTLL6Q8N841 843 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 RAB6BQ9NRW1 208 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 GPATCH2LQ9NWQ4 482 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 ZNF510Q9Y2H8 683 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 HEY1Q9Y5J3 304 aa24.84■■□□□ 1.57
CSNK1E-203ENST00000396832 MIPP30301 263 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 TBL3Q12788 808 aaKnown RBP24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 SLC26A11Q86WA9 606 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 LZICQ8WZA0 190 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 USP29Q9HBJ7 922 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 HMGXB4Q9UGU5 601 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 A0A0J9YVX5 310 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 CLPTM1O96005 669 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 RAG1P15918 1043 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 ZNF699Q32M78 642 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 KLC3Q6P597 504 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 ABHD15Q6UXT9 468 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 BBS12Q6ZW61 710 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 SLC7A3Q8WY07 619 aa24.83■■□□□ 1.57
CSNK1E-203ENST00000396832 NIF3L1Q9GZT8 377 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 CNTN6Q9UQ52 1028 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 COL2A1P02458 1487 aaPredicted RBP24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 WNT10BO00744 389 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 ERBB2P04626 1255 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 CDK18Q07002 472 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 CAPSQ13938 189 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 TMC7Q7Z402 723 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 BTBD9Q96Q07 612 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 PROCP04070 461 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 ATP5BP06576 529 aaKnown RBP24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 SNRPAP09012 282 aaKnown RBP24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 CDH6P55285 790 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 TLR1Q15399 786 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 HADHQ16836 314 aaKnown RBP24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 C15orf59Q2T9L4 293 aaPredicted RBP24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 XKR3Q5GH77 459 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 MROH9Q5TGP6 573 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 PRAMEF18Q5VWM3 479 aa24.82■■□□□ 1.56
CSNK1E-203ENST00000396832 ZNF772Q68DY9 489 aaPredicted RBP24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms