RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 PTGER3P43115 390 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 PLA2G4AP47712 749 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 VAMP7P51809 220 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 ZNF252P-AS1Q0IIN9 211 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 CCDC186Q7Z3E2 898 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 GRAMD1CQ8IYS0 662 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 PGBD3Q8N328 593 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 NAT16Q8N8M0 369 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 RLN3Q8WXF3 142 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 GTPBP4Q9BZE4 634 aaKnown RBP17.18■□□□□ 0.34
CLTA-203ENST00000396603 SLC32A1Q9H598 525 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 CD248Q9HCU0 757 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.18■□□□□ 0.34
CLTA-203ENST00000396603 CLIC5Q9NZA1 410 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 DNMT3LQ9UJW3 386 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 WASF3Q9UPY6 502 aa17.18■□□□□ 0.34
CLTA-203ENST00000396603 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.17■□□□□ 0.34
CLTA-203ENST00000396603 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 TMEM8BA6NDV4 472 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 RHOBTB3O94955 611 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 TYRP14679 529 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 GABRG2P18507 467 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 RPL13P26373 211 aaKnown RBP17.17■□□□□ 0.34
CLTA-203ENST00000396603 GTF2H1P32780 548 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 DUOXA1Q1HG43 343 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 C1orf220Q5T0J3 134 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 CEP135Q66GS9 1140 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 TMEFF1Q8IYR6 380 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 C12orf29Q8N999 325 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 CCDC150Q8NCX0 1101 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 CYFIP2Q96F07 1278 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 BBS2Q9BXC9 721 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 NIF3L1Q9GZT8 377 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 FAM49BQ9NUQ9 324 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 DNAJC17Q9NVM6 304 aaKnown RBP17.17■□□□□ 0.34
CLTA-203ENST00000396603 RMND1Q9NWS8 449 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 HMGXB4Q9UGU5 601 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 FBXO10Q9UK96 956 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 SLC6A14Q9UN76 642 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 USP3Q9Y6I4 520 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 THADAQ6YHU6 1953 aa17.17■□□□□ 0.34
CLTA-203ENST00000396603 A0A1W2PQF6 199 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 NEDD8-MDP1E9PL57 170 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 CILPO75339 1184 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 SMC2O95347 1197 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 SERPINF2P08697 491 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 IRF1P10914 325 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 KRT13P13646 458 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 ENGP17813 658 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 NR2F2P24468 414 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 KIF11P52732 1056 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 Q6ZNB5 142 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 METTL3Q86U44 580 aaKnown RBP17.16■□□□□ 0.34
CLTA-203ENST00000396603 ELOA2Q8IYF1 753 aaPredicted RBP17.16■□□□□ 0.34
CLTA-203ENST00000396603 GUF1Q8N442 669 aaKnown RBP17.16■□□□□ 0.34
CLTA-203ENST00000396603 ENGASEQ8NFI3 743 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 UBXN6Q9BZV1 441 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 TMEM74BQ9NUR3 256 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 CALCOCO1Q9P1Z2 691 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 SLC27A6Q9Y2P4 619 aa17.16■□□□□ 0.34
CLTA-203ENST00000396603 TNRC6BQ9UPQ9 1833 aaKnown RBP17.16■□□□□ 0.34
CLTA-203ENST00000396603 CYP26A1O43174 497 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 TBX18O95935 607 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 RALAP11233 206 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 RARGP13631 454 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 ACO1P21399 889 aaKnown RBP17.15■□□□□ 0.34
CLTA-203ENST00000396603 CHKAP35790 457 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 DGKGP49619 791 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 PGFP49763 221 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 COG7P83436 770 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 RPL6Q02878 288 aaKnown RBP17.15■□□□□ 0.34
CLTA-203ENST00000396603 HNRNPDQ14103 355 aaKnown RBP17.15■□□□□ 0.34
CLTA-203ENST00000396603 CHPFQ8IZ52 775 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 KDF1Q8NAX2 398 aaPredicted RBP17.15■□□□□ 0.34
CLTA-203ENST00000396603 IPO4Q8TEX9 1081 aaKnown RBP17.15■□□□□ 0.34
CLTA-203ENST00000396603 WBP2Q969T9 261 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 DUSP16Q9BY84 665 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 DCLK3Q9C098 648 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 CAPN10Q9HC96 672 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 TMEM8AQ9HCN3 771 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 OSER1Q9NX31 292 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 HCN2Q9UL51 889 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 NFE2L3Q9Y4A8 694 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 ABCA7Q8IZY2 2146 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 CEP295Q9C0D2 2601 aa17.15■□□□□ 0.34
CLTA-203ENST00000396603 IGHV1OR15-9A0A0B4J2B8 117 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 GIPC1O14908 333 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 ITPKAP23677 461 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 ADORA2BP29275 332 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 PSMC2P35998 433 aaKnown RBP17.14■□□□□ 0.33
CLTA-203ENST00000396603 ATXN3P54252 364 aaPredicted RBP17.14■□□□□ 0.33
CLTA-203ENST00000396603 GFPT1Q06210 699 aaPredicted RBP17.14■□□□□ 0.33
CLTA-203ENST00000396603 ZNF33AQ06730 810 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 SEMA3BQ13214 749 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 EGFLAMQ63HQ2 1017 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 KRT39Q6A163 491 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 SPOPLQ6IQ16 392 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 UNQ6494/PRO21346Q6UXR6 183 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 GPRIN1Q7Z2K8 1008 aa17.14■□□□□ 0.33
CLTA-203ENST00000396603 PIP4P1Q86T03 277 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms