RNA–Protein interactions for RNA: ENST00000396594.7

GNE-202, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 5,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-202ENST00000396594 TBX4P57082 545 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 KATNAL2Q8IYT4 538 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 ADAM28Q9UKQ2 775 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 LZTS3O60299 673 aaPredicted RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 YWHAQP27348 245 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 CARSP49589 748 aaKnown RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 CNGA3Q16281 694 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 HORMAD1Q86X24 394 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 MTMR9Q96QG7 549 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 KCNF1Q9H3M0 494 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 SENP2Q9HC62 589 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 CDH9Q9ULB4 789 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 ACOT9Q9Y305 439 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 UBR1Q8IWV7 1749 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 SYNCRIPO60506 623 aaKnown RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 KRT6AP02538 564 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 KRT6BP04259 564 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 FGRP09769 529 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 ZNF7P17097 686 aaPredicted RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 KRT6CP48668 564 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 YWHAZP63104 245 aaKnown RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 GTF2BQ00403 316 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 SLC6A3Q01959 620 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 FSCN1Q16658 493 aaKnown RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 BMT2Q1RMZ1 405 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 DENND1BQ6P3S1 775 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 LCA5Q86VQ0 697 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 VSIG10LQ86VR7 867 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 CDCA5Q96FF9 252 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 QRFPRQ96P65 431 aa16.11■□□□□ 0.17
GNE-202ENST00000396594 TSEN34Q9BSV6 310 aaKnown RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 COPS7BQ9H9Q2 264 aaPredicted RBP16.11■□□□□ 0.17
GNE-202ENST00000396594 A0A087X1B8 175 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 CCT8L1PA6NM43 557 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 TRIM49D1C9J1S8 452 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 TNFRSF8P28908 595 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 HNRNPH2P55795 449 aaKnown RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 RRP1BQ14684 758 aaKnown RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 GRM3Q14832 879 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 USP49Q70CQ1 688 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 ACOT1Q86TX2 421 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 REXO1L1PQ8IX06 675 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 HES6Q96HZ4 224 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 ZNF668Q96K58 619 aaPredicted RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 KLC4Q9NSK0 619 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 DDX43Q9NXZ2 648 aaKnown RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 SLC39A10Q9ULF5 831 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 TMEM114B3SHH9 223 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 SLITRK3O94933 977 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 CCR3P51677 355 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 TKTL1P51854 596 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 MARC1Q5VT66 337 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 CAPRIN2Q6IMN6 1127 aaKnown RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 USP33Q8TEY7 942 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 HEXDCQ8WVB3 486 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 UBE2E3Q969T4 207 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 VPS33AQ96AX1 596 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 FDXACB1Q9BRP7 624 aaPredicted RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 MMADHCQ9H3L0 296 aaPredicted RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 NR2E3Q9Y5X4 410 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 RBAK-RBAKDNI3L0D1 243 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 HMBSP08397 361 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 OCM2P0CE71 109 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 OCMP0CE72 109 aaPredicted RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 PTPRAP18433 802 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 CACNB2Q08289 660 aaPredicted RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 PRG3Q9Y2Y8 225 aaPredicted RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 A0A1W2PQ67 120 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 GLI1P08151 1106 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 KLRK1P26718 216 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 RAD23BP54727 409 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 SLC45A4Q5BKX6 768 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 GRAMD4Q6IC98 578 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 LRRC52Q8N7C0 313 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 SEC16BQ96JE7 1060 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 C9orf72Q96LT7 481 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 CBWD1Q9BRT8 395 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 CEP44Q9C0F1 390 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 PLA2G4CQ9UP65 541 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 SORCS3Q9UPU3 1222 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 GIT1Q9Y2X7 761 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 SLC12A8A0AV02 714 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 NFIBO00712 420 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 IRF1P10914 325 aa16.1■□□□□ 0.17
GNE-202ENST00000396594 PSMA4P25789 261 aaKnown RBP16.1■□□□□ 0.17
GNE-202ENST00000396594 A0A087X0T9 212 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 MAN1A2O60476 641 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 RAMP2O60895 175 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 CKMP06732 381 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 FAM228BP0C875 321 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 CKBP12277 381 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 ADORA2AP29274 412 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 LSP1P33241 339 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 MEA1Q16626 185 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 LONRF1Q17RB8 773 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 KIZQ2M2Z5 673 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 VPS50Q96JG6 964 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 ADGRA3Q8IWK6 1321 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 MRC1P22897 1456 aa16.09■□□□□ 0.17
GNE-202ENST00000396594 LRRC10BA6NIK2 292 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms