RNA–Protein interactions for RNA: ENST00000396548.5

TRIM39-204, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-204ENST00000396548 SCN4BQ8IWT1 228 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 TTLL2Q9BWV7 592 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 FNIP2Q9P278 1114 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 GOLGA6L10A0A0M3HER8 536 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 FGF18O76093 207 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 ARPP19P56211 112 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 SCAPQ12770 1279 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 DUSP4Q13115 394 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 RAB33AQ14088 237 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 CCNG2Q16589 344 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 BBS12Q6ZW61 710 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 FIBCD1Q8N539 461 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 KCTD6Q8NC69 237 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 ZNF461Q8TAF7 563 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 HNRNPLLQ8WVV9 542 aaKnown RBP13.25□□□□□ -0.29
TRIM39-204ENST00000396548 STK39Q9UEW8 545 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 AFF4Q9UHB7 1163 aaKnown RBP13.25□□□□□ -0.29
TRIM39-204ENST00000396548 MTUS1Q9ULD2 1270 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 STAP1Q9ULZ2 295 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 CHD7Q9P2D1 2997 aa13.25□□□□□ -0.29
TRIM39-204ENST00000396548 ZSCAN5CA6NGD5 496 aaPredicted RBP13.24□□□□□ -0.29
TRIM39-204ENST00000396548 M0QYT0 321 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 OBSL1O75147 1896 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 TUBBP07437 444 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 ZDHHC11BP0C7U3 371 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 NCAM1P13591 858 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 CXCR3P49682 368 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 MMRN1Q13201 1228 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 DHX34Q14147 1143 aaKnown RBP13.24□□□□□ -0.29
TRIM39-204ENST00000396548 SMC1AQ14683 1233 aaKnown RBP13.24□□□□□ -0.29
TRIM39-204ENST00000396548 TPGS2Q68CL5 300 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 CCNI2Q6ZMN8 369 aaPredicted RBP13.24□□□□□ -0.29
TRIM39-204ENST00000396548 EDEM1Q92611 657 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 NTAN1Q96AB6 310 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 KCTD15Q96SI1 283 aaPredicted RBP13.24□□□□□ -0.29
TRIM39-204ENST00000396548 FBXO44Q9H4M3 255 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 ABCC13Q9NSE7 274 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 GPATCH2LQ9NWQ4 482 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 FBXW11Q9UKB1 542 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 TTI1O43156 1089 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 TJP3O95049 919 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 MYBL2P10244 700 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 ATF2P15336 505 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 ECHS1P30084 290 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 CLCN6P51797 869 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 CCDC137Q6PK04 289 aaKnown RBP13.24□□□□□ -0.29
TRIM39-204ENST00000396548 VPS52Q8N1B4 723 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 PQLC3Q8N755 202 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 C1orf54Q8WWF1 131 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 ATG4AQ8WYN0 398 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 HTATIP2Q9BUP3 242 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 AAASQ9NRG9 546 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 ZMYND8Q9ULU4 1186 aaPredicted RBP13.24□□□□□ -0.29
TRIM39-204ENST00000396548 PCDHB12Q9Y5F1 795 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 SLC4A7Q9Y6M7 1214 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 ATG2AQ2TAZ0 1938 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 A0A1W2PQH9 124 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 AIF1P55008 147 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 SEMA3BQ13214 749 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 BRD3Q15059 726 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 TRADDQ15628 312 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 SLC9A4Q6AI14 798 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 SCYL2Q6P3W7 929 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 TAC4Q86UU9 113 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 MON1AQ86VX9 555 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 SLC7A14Q8TBB6 771 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 GPR152Q8TDT2 470 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 DQX1Q8TE96 717 aaKnown RBP13.24□□□□□ -0.29
TRIM39-204ENST00000396548 MAGOHBQ96A72 148 aaKnown RBP13.24□□□□□ -0.29
TRIM39-204ENST00000396548 RNF157Q96PX1 679 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 ZNF670Q9BS34 389 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 TRIM62Q9BVG3 475 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 SMOC2Q9H3U7 446 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 TMPRSS4Q9NRS4 437 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 ZNF446Q9NWS9 450 aa13.24□□□□□ -0.29
TRIM39-204ENST00000396548 CCDC151A5D8V7 595 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 C2CD2LO14523 706 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 LIASO43766 372 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 ZMYND10O75800 440 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 HEXIM1O94992 359 aaKnown RBP13.23□□□□□ -0.29
TRIM39-204ENST00000396548 CTSAP10619 480 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 ATP2A2P16615 1042 aaKnown RBP13.23□□□□□ -0.29
TRIM39-204ENST00000396548 CDH6P55285 790 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 DR1Q01658 176 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 DEUP1Q05D60 604 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 KCTD19Q17RG1 926 aaPredicted RBP13.23□□□□□ -0.29
TRIM39-204ENST00000396548 ANKRD20A8PQ5CZ79 823 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 MSANTD2Q6P1R3 559 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 FAM131BQ86XD5 332 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 KLHL23Q8NBE8 558 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 ADAM32Q8TC27 787 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 CASKIN2Q8WXE0 1202 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 HOMER3Q9NSC5 361 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 AP4E1Q9UPM8 1137 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 FAM187AA6NFU0 413 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 SLC38A8A6NNN8 435 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 RTN3O95197 1032 aaPredicted RBP13.23□□□□□ -0.29
TRIM39-204ENST00000396548 DESP17661 470 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 MTMR3Q13615 1198 aa13.23□□□□□ -0.29
TRIM39-204ENST00000396548 OASLQ15646 514 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms