RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 SPOCK2Q92563 424 aa11.99□□□□□ -0.49
PDXDC1-202ENST00000396410 KLHL8Q9P2G9 620 aaPredicted RBP11.99□□□□□ -0.49
PDXDC1-202ENST00000396410 TTLL3Q9Y4R7 772 aa11.99□□□□□ -0.49
PDXDC1-202ENST00000396410 TCRBV9S1A1TA0A576 114 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 TM9SF1O15321 606 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 CYP3A5P20815 502 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 LMO2P25791 158 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 FOXN2P32314 431 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 GSCP56915 257 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 TMPRSS15P98073 1019 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 GRB14Q14449 540 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 SNX17Q15036 470 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC1A5Q15758 541 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 SMYD5Q6GMV2 418 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 TRIM42Q8IWZ5 723 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 ZNF75CPQ92670 426 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.98□□□□□ -0.496e-7■■■□□ 15.3
PDXDC1-202ENST00000396410 PARP14Q460N5 1801 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 TNPO2O14787 897 aaKnown RBP11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 TREHO43280 583 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 ATP5HO75947 161 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 NQO1P15559 274 aaKnown RBP11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 PPP2R5DQ14738 602 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 OLFML1Q6UWY5 402 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 DNAAF3Q8N9W5 541 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 PCDH19Q8TAB3 1148 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC7A14Q8TBB6 771 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 L3MBTL3Q96JM7 780 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC4A5Q9BY07 1137 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 STARD13Q9Y3M8 1113 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 EEF2KO00418 725 aaKnown RBP11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 ASMTLO95671 621 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 ARFIP2P53365 341 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 ATXN1P54253 815 aaKnown RBP11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 MAP3K7CLP57077 242 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 ARL13BQ3SXY8 428 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 MDH1BQ5I0G3 518 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 ADGRD1Q6QNK2 874 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 PID1Q7Z2X4 250 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC45A1Q9Y2W3 748 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 CLUHO75153 1309 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 CCDC195A0A1B0GUA6 201 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 PPP1R12AO14974 1030 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 FAM200BP0CF97 657 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 TSHRP16473 764 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 ZNF157P51786 506 aaPredicted RBP11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC45A4Q5BKX6 768 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 TMEM110Q86TL2 294 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 PIGZQ86VD9 579 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC35F5Q8WV83 523 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 MORF4L1Q9UBU8 362 aa11.98□□□□□ -0.49
PDXDC1-202ENST00000396410 MDM4O15151 490 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 NR2C2P49116 596 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 YWHAZP63104 245 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 MAP2K5Q13163 448 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 SPRED3Q2MJR0 410 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 MARCH8Q5T0T0 291 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 MROH9Q5TGP6 573 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 METTL23Q86XA0 190 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 PGBD4Q96DM1 585 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 HSFY1Q96LI6 401 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 RILPQ96NA2 401 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 XAB2Q9HCS7 855 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 RBM47A0AV96 593 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 MXRA7P84157 204 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 GBE1Q04446 702 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 ATG16L1Q676U5 607 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 MAMDC4Q6UXC1 1216 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 B3GALNT2Q8NCR0 500 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 MCUR1Q96AQ8 359 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 PCMTD2Q9NV79 361 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC38A7Q9NVC3 462 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.97□□□□□ -0.492e-10■□□□□ 8.5
PDXDC1-202ENST00000396410 DPYSL4O14531 572 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 GOT1P17174 413 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 TARSP26639 723 aaKnown RBP11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 HOXA11P31270 313 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 ELF3P78545 371 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 BMPR2Q13873 1038 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 GNASQ5JWF2 1037 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 RNF43Q68DV7 783 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 STK32AQ8WU08 396 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 HTR3CQ8WXA8 447 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 RMDN2Q96LZ7 410 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 CEP41Q9BYV8 373 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 KRT82Q9NSB4 513 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 IPPQ9Y573 584 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 TIMM13Q9Y5L4 95 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 MCM3APO60318 1980 aa11.97□□□□□ -0.49
PDXDC1-202ENST00000396410 WDR81Q562E7 1941 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 CLDN5O00501 218 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 TKTL1P51854 596 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 HDAC4P56524 1084 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 XRCC4Q13426 336 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 PDK1Q15118 436 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 SPRYD7Q5W111 196 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 ARHGAP17Q68EM7 881 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 SLC26A9Q7LBE3 791 aa11.96□□□□□ -0.49
PDXDC1-202ENST00000396410 SUGP1Q8IWZ8 645 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms