RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 TFE3P19532 575 aaPredicted RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 TYMPP19971 482 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 ABCD3P28288 659 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 GARSP41250 739 aaKnown RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 LACTBP83111 547 aaPredicted RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 IL24Q13007 206 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 NCAPHQ15003 741 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 ACAP2Q15057 778 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 USH1GQ495M9 461 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TRIM61Q5EBN2 209 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 CFAP157Q5JU67 520 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 CCDC121Q6ZUS5 278 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TSPYL6Q8N831 410 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 DNAAF3Q8N9W5 541 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 CLHC1Q8NHS4 586 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 DDX17Q92841 729 aaKnown RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 PHKBQ93100 1093 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 PDCD2LQ9BRP1 358 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TPK1Q9H3S4 243 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 AZI2Q9H6S1 392 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 MRPL44Q9H9J2 332 aaKnown RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 ZDHHC18Q9NUE0 388 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 MAP10Q9P2G4 905 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 SUCLA2Q9P2R7 463 aaPredicted RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 VANGL2Q9ULK5 521 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 CAMK2AQ9UQM7 478 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 SH3D21A4FU49 640 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 H3BUI4 141 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 GOLGA8RI6L899 631 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 GPR171O14626 319 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 RAD51BO15315 384 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TOM1O60784 492 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 DIRAS3O95661 229 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 IGHEP01854 428 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 HNRNPA1P09651 372 aaKnown RBP eCLIP4.42□□□□□ -1.7
HERC4-204ENST00000395198 BMP1P13497 986 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 NCF1P14598 390 aaPredicted RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 SERPINF1P36955 418 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 ALDH9A1P49189 494 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 SLC11A1P49279 550 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 GATMP50440 423 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 ADCY7P51828 1080 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 PPATQ06203 517 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 ZNF543Q08ER8 600 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 LPIN1Q14693 890 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 PON2Q15165 354 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 CNN3Q15417 329 aaKnown RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 TBCELQ5QJ74 424 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 DENND5AQ6IQ26 1287 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 FAM171BQ6P995 826 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 MACC1Q6ZN28 852 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 C1orf186Q6ZWK4 172 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 LRRC6Q86X45 466 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TUSC5Q8IXB3 177 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 SYCE1Q8N0S2 351 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 RIN2Q8WYP3 895 aaPredicted RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 SH3GL2Q99962 352 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 PYM1Q9BRP8 204 aaKnown RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 PARD6GQ9BYG4 376 aaPredicted RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 MRPL40Q9NQ50 206 aaKnown RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 COX16Q9P0S2 106 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TEX14Q8IWB6 1497 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TMEM229AB2RXF0 380 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TGM5O43548 720 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 CPNE3O75131 537 aaKnown RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 PHACTR2O75167 634 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 PPM1BO75688 479 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 F13A1P00488 732 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 UBTFL6P0CB48 400 aaPredicted RBP4.42□□□□□ -1.7
HERC4-204ENST00000395198 AHCYP23526 432 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 SLC26A2P50443 739 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 DGKEP52429 567 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 PDE1BQ01064 536 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 SPCS2Q15005 226 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 STILQ15468 1287 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TMPRSS9Q7Z410 1059 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 CDH24Q86UP0 819 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 MON1AQ86VX9 555 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 DPP10Q8N608 796 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 DEPDC1BQ8WUY9 529 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 ASZ1Q8WWH4 475 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 JADE3Q92613 823 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 TTC9Q92623 222 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 MED30Q96HR3 178 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 C7orf34Q96L11 122 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 FER1L6-AS2Q96M78 137 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 LMF1Q96S06 567 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 CCDC77Q9BR77 488 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 NUDT15Q9NV35 164 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 ASIC3Q9UHC3 531 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 PCDHA7Q9UN72 937 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 PCDHA10Q9Y5I2 948 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 SPATA31A3Q5VYP0 1347 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 FAM135AQ9P2D6 1515 aa4.42□□□□□ -1.7
HERC4-204ENST00000395198 FAM237AA0A1B0GTK4 181 aa4.41□□□□□ -1.7
HERC4-204ENST00000395198 LINC01387J3KSC0 135 aa4.41□□□□□ -1.7
HERC4-204ENST00000395198 TMCC1O94876 653 aa4.41□□□□□ -1.7
HERC4-204ENST00000395198 UBXN7O94888 489 aa4.41□□□□□ -1.7
HERC4-204ENST00000395198 PDE8BO95263 885 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms