RNA–Protein interactions for RNA: ENST00000394925.5

TRAF4-203, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-203ENST00000394925 LSM7Q9UK45 103 aaKnown RBP22.31■■□□□ 1.16
TRAF4-203ENST00000394925 FASNP49327 2511 aaKnown RBP22.3■■□□□ 1.16
TRAF4-203ENST00000394925 POLR2DO15514 142 aaKnown RBP22.3■■□□□ 1.16
TRAF4-203ENST00000394925 CUTAO60888 179 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 NDUFS2O75306 463 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 NDST1P52848 882 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 AP3M2P53677 418 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 GOLGA8FQ08AF8 430 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 GOLGA8DPQ0D2H9 430 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 PLEKHG6Q3KR16 790 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 C12orf29Q8N999 325 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 BHMTQ93088 406 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 ZNF419Q96HQ0 510 aaPredicted RBP22.3■■□□□ 1.16
TRAF4-203ENST00000394925 CAMK1GQ96NX5 476 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 CSNK1G1Q9HCP0 422 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 DNAAF2Q9NVR5 837 aaKnown RBP22.3■■□□□ 1.16
TRAF4-203ENST00000394925 MARK1Q9P0L2 795 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 HMGXB4Q9UGU5 601 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 LHX6Q9UPM6 363 aa22.3■■□□□ 1.16
TRAF4-203ENST00000394925 WASH3PC4AMC7 463 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 SH3BP5O60239 455 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 P4HA1P13674 534 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 ADORA2BP29275 332 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 DGKGP49619 791 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 ZNF423Q2M1K9 1284 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 LRSAM1Q6UWE0 723 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 KIAA1324Q6UXG2 1013 aaKnown RBP22.29■■□□□ 1.16
TRAF4-203ENST00000394925 GPRIN1Q7Z2K8 1008 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 CRYBG2Q8N1P7 616 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 JAKMIP2Q96AA8 810 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 INTS4Q96HW7 963 aaKnown RBP22.29■■□□□ 1.16
TRAF4-203ENST00000394925 MRGPRX1Q96LB2 322 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 ZNF396Q96N95 335 aaPredicted RBP22.29■■□□□ 1.16
TRAF4-203ENST00000394925 MAGEF1Q9HAY2 307 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 CYLDQ9NQC7 956 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 OSER1Q9NX31 292 aa22.29■■□□□ 1.16
TRAF4-203ENST00000394925 FAM221BA6H8Z2 402 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 MDM4O15151 490 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 CYP26A1O43174 497 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 CISD3P0C7P0 127 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 MAOBP27338 520 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 AFMP43652 599 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 CLDN10P78369 228 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 CUL4BQ13620 913 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 HNRNPDQ14103 355 aaKnown RBP22.28■■□□□ 1.16
TRAF4-203ENST00000394925 TRIP6Q15654 476 aaKnown RBP22.28■■□□□ 1.16
TRAF4-203ENST00000394925 SGSM1Q2NKQ1 1148 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 SYCP2LQ5T4T6 812 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 RAB44Q7Z6P3 723 aaPredicted RBP22.28■■□□□ 1.16
TRAF4-203ENST00000394925 FAM124BQ9H5Z6 455 aaPredicted RBP22.28■■□□□ 1.16
TRAF4-203ENST00000394925 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.28■■□□□ 1.161e-9■■■■■ 64.8
TRAF4-203ENST00000394925 PLK2Q9NYY3 685 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 NUDT5Q9UKK9 219 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 SCML2Q9UQR0 700 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 ITPR1Q14643 2758 aa22.28■■□□□ 1.16
TRAF4-203ENST00000394925 PVALEFA0A1B0GWK0 134 aa22.27■■□□□ 1.16
TRAF4-203ENST00000394925 FAM200BP0CF97 657 aa22.27■■□□□ 1.16
TRAF4-203ENST00000394925 DLG4P78352 724 aa22.27■■□□□ 1.16
TRAF4-203ENST00000394925 UNC93AQ86WB7 457 aa22.27■■□□□ 1.16
TRAF4-203ENST00000394925 GOLGA5Q8TBA6 731 aa22.27■■□□□ 1.16
TRAF4-203ENST00000394925 FOXJ1Q92949 421 aa22.27■■□□□ 1.16
TRAF4-203ENST00000394925 NMUR1Q9HB89 426 aa22.27■■□□□ 1.16
TRAF4-203ENST00000394925 SUSD2Q9UGT4 822 aa22.27■■□□□ 1.16
TRAF4-203ENST00000394925 PCDHB9Q9Y5E1 797 aa22.27■■□□□ 1.16
TRAF4-203ENST00000394925 A0A1W2PQH9 124 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 TAF4O00268 1085 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 GFRA2O00451 464 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 GJB3O75712 270 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 YEATS4O95619 227 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 RARGP13631 454 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 GNSP15586 552 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 ACO1P21399 889 aaKnown RBP22.26■■□□□ 1.15
TRAF4-203ENST00000394925 SLC14A1Q13336 389 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 WDR45BQ5MNZ6 344 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 SPOPLQ6IQ16 392 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 SPRYD3Q8NCJ5 442 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 LAMA5O15230 3695 aa22.26■■□□□ 1.15
TRAF4-203ENST00000394925 HHLA1C9JL84 531 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 CD6P30203 668 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 PLA2G4AP47712 749 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 ZACNQ401N2 412 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 C10orf120Q5SQS8 335 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 CLEC20AQ6ZU45 233 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 GRAMD1CQ8IYS0 662 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 PNPLA1Q8N8W4 532 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 P2RY11Q96G91 374 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.25■■□□□ 1.15
TRAF4-203ENST00000394925 DMAC2Q9NW81 257 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 DNMT3LQ9UJW3 386 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 STON1Q9Y6Q2 735 aa22.25■■□□□ 1.15
TRAF4-203ENST00000394925 RPN1P04843 607 aaKnown RBP22.24■■□□□ 1.15
TRAF4-203ENST00000394925 ASPAP45381 313 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 GRIK2Q13002 908 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 STARD3Q14849 445 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 FUT11Q495W5 492 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 FOXD4L5Q5VV16 416 aaPredicted RBP22.24■■□□□ 1.15
TRAF4-203ENST00000394925 Q6ZNB5 142 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 SV2AQ7L0J3 742 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 NAXDQ8IW45 347 aa22.24■■□□□ 1.15
TRAF4-203ENST00000394925 FOXD4L4Q8WXT5 416 aaPredicted RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms