RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 PCDHGC3Q9UN70 934 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 AP4E1Q9UPM8 1137 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 E2F8A0AVK6 867 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 ASB14A6NK59 587 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 PTPRAP18433 802 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 SLC26A2P50443 739 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 STX1BP61266 288 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 GRM1Q13255 1194 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 TMEM132BQ14DG7 1078 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 EFHC1Q5JVL4 640 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 PPWD1Q96BP3 646 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 C12orf65Q9H3J6 166 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 PAPOLBQ9NRJ5 636 aaKnown RBP12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 RPS6KL1Q9Y6S9 549 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 SLX4Q8IY92 1834 aa12.07□□□□□ -0.48
UBE2D3-209ENST00000394804 M0QZ92 97 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 GSC2O15499 205 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 ZCCHC18P0CG32 403 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 SETSIPP0DME0 302 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 ACO1P21399 889 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 ARL2P36404 184 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 LACTBL1A8MY62 500 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 SLC25A27O95847 323 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 TPBGLP0DKB5 382 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 TCF4P15884 667 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 COG7P83436 770 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 NOMO1Q15155 1222 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 LY6KQ17RY6 165 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 ZCCHC23Q6ZST2 131 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 RNF181Q9P0P0 153 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 ARHGAP26Q9UNA1 814 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 BHMG1C9JSJ3 638 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 NEMP1O14524 444 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 GIPC1O14908 333 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 TGDSO95455 350 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 MCF2P10911 925 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 ATP4AP20648 1035 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 SATB1Q01826 763 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 N4BP2L1Q5TBK1 243 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 JADE1Q6IE81 842 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 KYAT3Q6YP21 454 aaKnown RBP12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 SPDYE1Q8NFV5 336 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 CPXM1Q96SM3 734 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 SIKE1Q9BRV8 207 aa12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 COL11A2P13942 1736 aaPredicted RBP12.06□□□□□ -0.48
UBE2D3-209ENST00000394804 ZBTB48P10074 688 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 RALBP11234 206 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 SEPT6Q14141 434 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 OASLQ15646 514 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 CNGA3Q16281 694 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 LRRC23Q53EV4 343 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 KRT80Q6KB66 452 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 FAM228AQ86W67 206 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 BANPQ8N9N5 519 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 CATSPER1Q8NEC5 780 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 TRAPPC12Q8WVT3 735 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 TFAP2BQ92481 460 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 JADE3Q92613 823 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 HERPUD2Q9BSE4 406 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 NMRK1Q9NWW6 199 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 NRXN2Q9P2S2 1712 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 NFKBIEO00221 500 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 AIM2O14862 343 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 CSDE1O75534 798 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 SERPINE1P05121 402 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 PAPOLAP51003 745 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 TPI1P60174 286 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 CHSY1Q86X52 802 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 SLC25A41Q8N5S1 370 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 ZNF526Q8TF50 670 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 SLC5A4Q9NY91 659 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 PRKAG3Q9UGI9 489 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 ITGA11Q9UKX5 1188 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 A0A087WZ62 844 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 ABLIM1O14639 778 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 OAS1P00973 400 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 PIGRP01833 764 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 NFICP08651 508 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 PTPN7P35236 360 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 GDF10P55107 478 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 DCAF6Q58WW2 860 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 TXNRD3NBQ6F5E7 133 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 CATSPERGQ6ZRH7 1159 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 NIPA2Q8N8Q9 360 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 FDXACB1Q9BRP7 624 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 CDT1Q9H211 546 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 GTSE1Q9NYZ3 720 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 IPO11Q9UI26 975 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 CLUHO75153 1309 aa12.05□□□□□ -0.48
UBE2D3-209ENST00000394804 EEF2KO00418 725 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 GRIN3BO60391 1043 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 PEX11AO75192 247 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 AVILO75366 819 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 SLC1A6P48664 564 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 ITKQ08881 620 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 MGAT5Q09328 741 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 KCNT2Q6UVM3 1135 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 C16orf89Q6UX73 402 aa12.04□□□□□ -0.48
UBE2D3-209ENST00000394804 NMUR2Q9GZQ4 415 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms