RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 C8orf48Q96LL4 319 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 MROQ9BYG7 248 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 C1orf21Q9H246 121 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 CPVLQ9H3G5 476 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 DNAJC12Q9UKB3 198 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 CDH7Q9ULB5 785 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 SQORQ9Y6N5 450 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 DGKBQ9Y6T7 804 aa12.95□□□□□ -0.34
SLC28A1-203ENST00000394573 KIDINS220Q9ULH0 1771 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 ERVV-2B6SEH9 535 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 CLIC2O15247 247 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 PARNO95453 639 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 THOP1P52888 689 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 CDHR3Q6ZTQ4 885 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 ZSCAN18Q8TBC5 510 aaPredicted RBP12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 HDAC2Q92769 488 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 SERAC1Q96JX3 654 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 PAFAH2Q99487 392 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 IL12RB2Q99665 862 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 NYXQ9GZU5 481 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 GDAP2Q9NXN4 497 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 HMGXB4Q9UGU5 601 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 IKBKGQ9Y6K9 419 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 TOR1BO14657 336 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 AKAP3O75969 853 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 TCN1P20061 433 aaPredicted RBP12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 HADHAP40939 763 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 EIF2B5Q13144 721 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 STILQ15468 1287 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 CHI3L2Q15782 390 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 DALRD3Q5D0E6 543 aaKnown RBP12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 PXDC1Q5TGL8 231 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 SLC30A10Q6XR72 485 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 TDRPQ86YL5 185 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 KBTBD7Q8WVZ9 684 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 RAD54LQ92698 747 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 HTRA1Q92743 480 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 COQ10BQ9H8M1 238 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 NEK6Q9HC98 313 aa12.94□□□□□ -0.34
SLC28A1-203ENST00000394573 ESYT2A0FGR8 921 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 PDE8AO60658 829 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 MT-ND3P03897 115 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 ABHD2P08910 425 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 ANXA13P27216 316 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 SSTR3P32745 418 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 PKNOX1P55347 436 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 SUZ12Q15022 739 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 SF3B3Q15393 1217 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 AGAP9Q5VTM2 703 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 AGAP7PQ5VUJ5 663 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 CENPUQ71F23 418 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 PIWIL3Q7Z3Z3 882 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 POLNQ7Z5Q5 900 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 HACE1Q8IYU2 909 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 AK8Q96MA6 479 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 PSD2Q9BQI7 771 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 DNAJC28Q9NX36 388 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 SNTG2Q9NY99 539 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 ZNF229Q9UJW7 825 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 HEG1Q9ULI3 1381 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 TM9SF1O15321 606 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 B4GALT4O60513 344 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 USP12O75317 370 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 BBOX1O75936 387 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 NCF2P19878 526 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 RCAN1P53805 252 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 BASP1P80723 227 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 CAV1Q03135 178 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 RAB39AQ14964 217 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 NEK5Q6P3R8 708 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 AKAP14Q86UN6 197 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 TICAM1Q8IUC6 712 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 ZCCHC9Q8N567 271 aaKnown RBP12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 BEND7Q8N7W2 519 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 GALNT6Q8NCL4 622 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 USP13Q92995 863 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 OSBPL11Q9BXB4 747 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 RTFDC1Q9BY42 306 aaPredicted RBP12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 POLR1BQ9H9Y6 1135 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 ZNF304Q9HCX3 659 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 STRIP2Q9ULQ0 834 aa12.93□□□□□ -0.34
SLC28A1-203ENST00000394573 CFLARO15519 480 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 SERPINA6P08185 405 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 GNAO1P09471 354 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 GPX6P59796 221 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 NFATC3Q12968 1075 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 FLOT2Q14254 428 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 PPP1R3AQ16821 1122 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 ANO4Q32M45 955 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 SLC10A5Q5PT55 438 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 C11orf63Q6NUN7 778 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 GLRX5Q86SX6 157 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 APPL2Q8NEU8 664 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 NPLOC4Q8TAT6 608 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 TFB1MQ8WVM0 346 aaKnown RBP12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 CD101Q93033 1021 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 DNAJC19Q96DA6 116 aa12.92□□□□□ -0.34
SLC28A1-203ENST00000394573 KCTD10Q9H3F6 313 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms