RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 PLXNA3P51805 1871 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 USP17L7P0C7H9 530 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 TGM2P21980 687 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 CHKAP35790 457 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 GATMP50440 423 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 ATN1P54259 1190 aaPredicted RBP15.57■□□□□ 0.08
CCT4-201ENST00000394440 GDF10P55107 478 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 ZNF844Q08AG5 666 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 P3H1Q32P28 736 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 C1orf53Q5VUE5 145 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 NPNTQ6UXI9 565 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 FAM131BQ86XD5 332 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 OR2W6PQ8NHA6 318 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 IRGQQ8WZA9 623 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 KCTD15Q96SI1 283 aaPredicted RBP15.57■□□□□ 0.08
CCT4-201ENST00000394440 MAK16Q9BXY0 300 aaKnown RBP15.57■□□□□ 0.08
CCT4-201ENST00000394440 SEMA4AQ9H3S1 761 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 ANAPC5Q9UJX4 755 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 NAALADL1Q9UQQ1 740 aa15.57■□□□□ 0.08
CCT4-201ENST00000394440 SYN3O14994 580 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 MCF2LO15068 1137 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 PARNO95453 639 aaKnown RBP15.56■□□□□ 0.08
CCT4-201ENST00000394440 LTFP02788 710 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 RBP3P10745 1247 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 RDXP35241 583 aaKnown RBP15.56■□□□□ 0.08
CCT4-201ENST00000394440 GYS2P54840 703 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 EIF3EP60228 445 aaKnown RBP15.56■□□□□ 0.08
CCT4-201ENST00000394440 ABI1Q8IZP0 508 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 PGAP3Q96FM1 320 aaPredicted RBP15.56■□□□□ 0.08
CCT4-201ENST00000394440 MAGEB5Q9BZ81 275 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 ZCWPW1Q9H0M4 648 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 DHX35Q9H5Z1 703 aaKnown RBP15.56■□□□□ 0.08
CCT4-201ENST00000394440 MARCH5Q9NX47 278 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 LTBP2Q14767 1821 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 M0QYT0 321 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 SGK1O00141 431 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 TRAPPC3O43617 180 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 TERF2Q15554 542 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 PPP6R3Q5H9R7 873 aaPredicted RBP15.56■□□□□ 0.08
CCT4-201ENST00000394440 CEP85LQ5SZL2 805 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 UBAP2Q5T6F2 1119 aaKnown RBP15.56■□□□□ 0.08
CCT4-201ENST00000394440 C4orf50Q6ZRC1 276 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 NPAS4Q8IUM7 802 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.56■□□□□ 0.08
CCT4-201ENST00000394440 P3H4Q92791 437 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 TSPYL1Q9H0U9 437 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 ADAM21Q9UKJ8 722 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 ADAM28Q9UKQ2 775 aa15.56■□□□□ 0.08
CCT4-201ENST00000394440 APOL1O14791 398 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 CYP2F1P24903 491 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 MRPL58Q14197 206 aaKnown RBP15.55■□□□□ 0.08
CCT4-201ENST00000394440 FBXO46Q6PJ61 603 aaPredicted RBP15.55■□□□□ 0.08
CCT4-201ENST00000394440 UNC45BQ8IWX7 931 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 GOLGA6L1Q8N7Z2 621 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 SLC9A7Q96T83 725 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 C10orf88Q9H8K7 445 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 FAM204AQ9H8W3 233 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 TMBIM4Q9HC24 238 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 WDR6Q9NNW5 1121 aaKnown RBP15.55■□□□□ 0.08
CCT4-201ENST00000394440 PIGVQ9NUD9 493 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 RCOR3Q9P2K3 495 aaPredicted RBP15.55■□□□□ 0.08
CCT4-201ENST00000394440 COL4A6Q14031 1691 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 TNFRSF10BO14763 440 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 HOXA2O43364 376 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 OR4Q2P0C623 313 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 CCL23P55773 120 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 TLE2Q04725 743 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 GPS1Q13098 491 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 TRIM60Q495X7 471 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 RNASEH2BQ5TBB1 312 aaKnown RBP15.55■□□□□ 0.08
CCT4-201ENST00000394440 RELL1Q8IUW5 271 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 CSPG4P5Q96PW8 444 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 FOXP3Q9BZS1 431 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 CDC42EP4Q9H3Q1 356 aaKnown RBP15.55■□□□□ 0.08
CCT4-201ENST00000394440 RRN3Q9NYV6 651 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 HCSTQ9UBK5 93 aa15.55■□□□□ 0.08
CCT4-201ENST00000394440 DCDC2CA8MYV0 355 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 RIPK2O43353 540 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 TADA2AO75478 443 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 SLC11A1P49279 550 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 EIF3BP55884 814 aaKnown RBP15.54■□□□□ 0.08
CCT4-201ENST00000394440 BCAR1P56945 870 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 DEUP1Q05D60 604 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 VARS2Q5ST30 1063 aaKnown RBP15.54■□□□□ 0.08
CCT4-201ENST00000394440 TRMT10CQ7L0Y3 403 aaKnown RBP15.54■□□□□ 0.08
CCT4-201ENST00000394440 SPATA2LQ8IUW3 424 aaPredicted RBP15.54■□□□□ 0.08
CCT4-201ENST00000394440 NTAN1Q96AB6 310 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 PPP1R12CQ9BZL4 782 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 CWC15Q9P013 229 aaKnown RBP15.54■□□□□ 0.08
CCT4-201ENST00000394440 TBX21Q9UL17 535 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 LRFN2Q9ULH4 789 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 TPX2Q9ULW0 747 aaKnown RBP15.54■□□□□ 0.08
CCT4-201ENST00000394440 GREB1Q4ZG55 1949 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 GOLGA6CA6NDK9 693 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 IFNB1P01574 187 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 GOLGA6DP0CG33 693 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 SCAPQ12770 1279 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 SLC39A12Q504Y0 691 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 BEND5Q7L4P6 421 aa15.54■□□□□ 0.08
CCT4-201ENST00000394440 PYROXD2Q8N2H3 581 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms