RNA–Protein interactions for RNA: ENST00000394157.7

PSEN1-203, Transcript of presenilin 1, humanhuman

TSL 2 BASIC

Gene PSEN1, Length 1,249 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-203ENST00000394157 SMAD2Q15796 467 aaKnown RBP20.21■□□□□ 0.83
PSEN1-203ENST00000394157 DCAF6Q58WW2 860 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 C10orf120Q5SQS8 335 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 OTOP3Q7RTS5 596 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 KIAA1328Q86T90 577 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 NPAS3Q8IXF0 933 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 CMTM8Q8IZV2 173 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 DEFB106AQ8N104 65 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 MAB21L3Q8N8X9 362 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 ACRBPQ8NEB7 543 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 RFFLQ8WZ73 363 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 EDEM1Q92611 657 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 FGF13Q92913 245 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 NT5C3BQ969T7 300 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 SLC46A2Q9BY10 475 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 KCNF1Q9H3M0 494 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 SMOC2Q9H3U7 446 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 SLITRK6Q9H5Y7 841 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 CCSER2Q9H7U1 834 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 TRPC7Q9HCX4 862 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 MYO1AQ9UBC5 1043 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 REXO2Q9Y3B8 237 aaKnown RBP20.21■□□□□ 0.83
PSEN1-203ENST00000394157 ANAPC1Q9H1A4 1944 aa20.21■□□□□ 0.83
PSEN1-203ENST00000394157 DOCK6Q96HP0 2047 aa20.2■□□□□ 0.83
PSEN1-203ENST00000394157 C2orf78A6NCI8 922 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 TMEM191CA6NGB0 347 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 C2CD4BA6NLJ0 364 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 BTNL10A8MVZ5 291 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 COCHO43405 550 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 PDGFRAP16234 1089 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 GJA1P17302 382 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 SDC4P31431 198 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 RFC1P35251 1148 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-203ENST00000394157 AVPR1AP37288 418 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 PTPN9P43378 593 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 RNASE9P60153 205 aaKnown RBP20.2■□□□□ 0.82
PSEN1-203ENST00000394157 NNTQ13423 1086 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 SLC25A52Q3SY17 297 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 GET4Q7L5D6 327 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-203ENST00000394157 PHLDB2Q86SQ0 1253 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-203ENST00000394157 ACSF2Q96CM8 615 aaPredicted RBP20.2■□□□□ 0.82
PSEN1-203ENST00000394157 ARHGEF26Q96DR7 871 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 MCEEQ96PE7 176 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 NUP85Q9BW27 656 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 CTTNBP2NLQ9P2B4 639 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 CDH22Q9UJ99 828 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 NAALADL1Q9UQQ1 740 aa20.2■□□□□ 0.82
PSEN1-203ENST00000394157 DPYSL4O14531 572 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 MTA2O94776 668 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 F9P00740 461 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 CKMP06732 381 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 GPD1P21695 349 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 GBP1P32455 592 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 FLT3P36888 993 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 ZNF143P52747 638 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-203ENST00000394157 COG7P83436 770 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 KIF5AQ12840 1032 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 SYPL2Q5VXT5 272 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 PTCRAQ6ISU1 281 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-203ENST00000394157 ZNF662Q6ZS27 426 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 DDX42Q86XP3 938 aaKnown RBP eCLIP20.19■□□□□ 0.82
PSEN1-203ENST00000394157 ZNF564Q8TBZ8 553 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-203ENST00000394157 DQX1Q8TE96 717 aaKnown RBP20.19■□□□□ 0.82
PSEN1-203ENST00000394157 RXFP2Q8WXD0 754 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 ING5Q8WYH8 240 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 PGAP3Q96FM1 320 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-203ENST00000394157 SERPINB11Q96P15 392 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 NPY6RQ99463 290 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 NCAPGQ9BPX3 1015 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 DESI2Q9BSY9 194 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 PHF7Q9BWX1 381 aaPredicted RBP20.19■□□□□ 0.82
PSEN1-203ENST00000394157 TSGA10Q9BZW7 698 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 KIF9Q9HAQ2 790 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 TRPV4Q9HBA0 871 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 MARCH2Q9P0N8 246 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 THEGQ9P2T0 379 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 HBS1LQ9Y450 684 aaKnown RBP20.19■□□□□ 0.82
PSEN1-203ENST00000394157 NR2E1Q9Y466 385 aa20.19■□□□□ 0.82
PSEN1-203ENST00000394157 TCF3P15923 654 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 HADHBP55084 474 aaKnown RBP20.18■□□□□ 0.82
PSEN1-203ENST00000394157 RPL7AP62424 266 aaKnown RBP20.18■□□□□ 0.82
PSEN1-203ENST00000394157 EFEMP1Q12805 493 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 ACAP1Q15027 740 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 HS1BP3Q53T59 392 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 STXBP5Q5T5C0 1151 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 KIAA1958Q8N8K9 716 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 ARL14EPQ8N8R7 260 aaPredicted RBP20.18■□□□□ 0.82
PSEN1-203ENST00000394157 JOSD2Q8TAC2 188 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 SLC35G2Q8TBE7 412 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 SMARCD2Q92925 531 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 E2F7Q96AV8 911 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 CNPY3Q9BT09 278 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 RNF38Q9H0F5 515 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 EPS15L1Q9UBC2 864 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 ARHGAP26Q9UNA1 814 aa20.18■□□□□ 0.82
PSEN1-203ENST00000394157 MYO1FO00160 1098 aa20.17■□□□□ 0.82
PSEN1-203ENST00000394157 NRG2O14511 850 aaPredicted RBP20.17■□□□□ 0.82
PSEN1-203ENST00000394157 TRUB2O95900 331 aaKnown RBP20.17■□□□□ 0.82
PSEN1-203ENST00000394157 IGLV3-25P01717 112 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms