RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ABHD16BQ9H3Z7 469 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 HMX1Q9NP08 348 aaPredicted RBP9.41□□□□□ -0.9
CDH11-202ENST00000394156 PAK5Q9P286 719 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 CRLS1Q9UJA2 301 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 NAALADL1Q9UQQ1 740 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 FRMPD4Q14CM0 1322 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 PCDH8O95206 1070 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 HOXA10P31260 410 aaPredicted RBP9.41□□□□□ -0.9
CDH11-202ENST00000394156 STAT4Q14765 748 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 TADA2BQ86TJ2 420 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 RIOX2Q8IUF8 465 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 ARID3BQ8IVW6 561 aaPredicted RBP9.41□□□□□ -0.9
CDH11-202ENST00000394156 HOMEZQ8IX15 550 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 RNF148Q8N7C7 305 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 ZBTB18Q99592 522 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 TRMT13Q9NUP7 481 aaKnown RBP9.41□□□□□ -0.9
CDH11-202ENST00000394156 CDK5RAP2Q96SN8 1893 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 C9IYK1 514 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 SUPT7LO94864 414 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 GJA9P57773 515 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 TMED1Q13445 227 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 HSP90AA5PQ58FG0 334 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 FBXO48Q5FWF7 155 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 TMEM192Q8IY95 271 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 C2orf73Q8N5S3 287 aaPredicted RBP9.41□□□□□ -0.9
CDH11-202ENST00000394156 CYGBQ8WWM9 190 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 NDNQ99608 321 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 TM6SF2Q9BZW4 377 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 DRC3Q9H069 523 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 RBM22Q9NW64 420 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDH11-202ENST00000394156 MPP6Q9NZW5 540 aa9.41□□□□□ -0.9
CDH11-202ENST00000394156 SPDYE5A6NIY4 337 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 EIF3HO15372 352 aaKnown RBP eCLIP9.4□□□□□ -0.9
CDH11-202ENST00000394156 URODP06132 367 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 YBX3P16989 372 aaKnown RBP eCLIP9.4□□□□□ -0.9
CDH11-202ENST00000394156 CDC25CP30307 473 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 SPDYE7PQ495Y7 208 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 ANKRD20A4Q4UJ75 823 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 ANKRD20A8PQ5CZ79 823 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 ANKRD20A2Q5SQ80 823 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 ANKRD20A1Q5TYW2 823 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 SLC27A1Q6PCB7 646 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 MARK2Q7KZI7 788 aaKnown RBP9.4□□□□□ -0.9
CDH11-202ENST00000394156 PARP9Q8IXQ6 854 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 TMEM161BQ8NDZ6 487 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 STAMBPL1Q96FJ0 436 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 BRD8Q9H0E9 1235 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 SENP1Q9P0U3 644 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 TELO2Q9Y4R8 837 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 RNF103-CHMP3A0A140T963 221 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 SLC8A1P32418 973 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 CHKAP35790 457 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 ATXN1P54253 815 aaKnown RBP9.4□□□□□ -0.9
CDH11-202ENST00000394156 CORO1BQ9BR76 489 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 C2orf71A6NGG8 1288 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 PPP1R37O75864 691 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 AKR1A1P14550 325 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 FLT3P36888 993 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 ARHGDIAP52565 204 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 VSIG10LQ86VR7 867 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 XPO6Q96QU8 1125 aaKnown RBP9.4□□□□□ -0.9
CDH11-202ENST00000394156 RAD18Q9NS91 495 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 WDR35Q9P2L0 1181 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 SIK3Q9Y2K2 1263 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 SCN11AQ9UI33 1791 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 BST2Q10589 180 aaKnown RBP9.4□□□□□ -0.9
CDH11-202ENST00000394156 GALNT3Q14435 633 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 MAP3K21Q5TCX8 1036 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 ATP6V0D2Q8N8Y2 350 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 FBXO41Q8TF61 875 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 RELTQ969Z4 430 aa9.4□□□□□ -0.9
CDH11-202ENST00000394156 MROH7Q68CQ1 1323 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 ARHGAP10A1A4S6 786 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 RHOCP08134 193 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 UBTFL6P0CB48 400 aaPredicted RBP9.4□□□□□ -0.91
CDH11-202ENST00000394156 FUT2Q10981 343 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 C4orf32Q8N8J7 132 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 CATSPER2Q96P56 530 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 C12orf65Q9H3J6 166 aaKnown RBP9.4□□□□□ -0.91
CDH11-202ENST00000394156 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.4□□□□□ -0.91
CDH11-202ENST00000394156 ARMCX1Q9P291 453 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 PCDH10Q9P2E7 1040 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 PHTF1Q9UMS5 762 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 IGF2BP3O00425 579 aaKnown RBP eCLIP9.4□□□□□ -0.91
CDH11-202ENST00000394156 PSTPIP1O43586 416 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 HCRTO43612 131 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 PSMB4P28070 264 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 ELK3P41970 407 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 TAF5Q15542 800 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 CNBD2Q96M20 576 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 OSBPL1AQ9BXW6 950 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 TRIM33Q9UPN9 1127 aa9.4□□□□□ -0.91
CDH11-202ENST00000394156 COL1A1P02452 1464 aaPredicted RBP9.39□□□□□ -0.91
CDH11-202ENST00000394156 PJA2O43164 708 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 FARP2O94887 1054 aaPredicted RBP9.39□□□□□ -0.91
CDH11-202ENST00000394156 MYBL2P10244 700 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 ACRP10323 421 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 GSSP48637 474 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 TAS2R40P59535 323 aa9.39□□□□□ -0.91
CDH11-202ENST00000394156 PPIL2Q13356 520 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms