RNA–Protein interactions for RNA: ENST00000393091.6

USP44-202, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 3,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-202ENST00000393091 RRM1P23921 792 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 SCAPQ12770 1279 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 PPP2R5DQ14738 602 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 HTR3DQ70Z44 454 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 VSIG1Q86XK7 387 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 C12orf76Q8N812 135 aaPredicted RBP13.87□□□□□ -0.19
USP44-202ENST00000393091 PIWIL1Q96J94 861 aaKnown RBP13.87□□□□□ -0.19
USP44-202ENST00000393091 ASB16Q96NS5 453 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 SLC46A2Q9BY10 475 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 THAP2Q9H0W7 228 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 DEF6Q9H4E7 631 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 POMKQ9H5K3 350 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.87□□□□□ -0.19
USP44-202ENST00000393091 DNMT3LQ9UJW3 386 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 PRRC2BQ5JSZ5 2229 aaKnown RBP13.87□□□□□ -0.19
USP44-202ENST00000393091 TRAV19A0A0A6YYK7 116 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 COCHO43405 550 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 NRDCO43847 1150 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 PCK1P35558 622 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 C11orf63Q6NUN7 778 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 OTOP3Q7RTS5 596 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 SLFN11Q7Z7L1 901 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 PLCD3Q8N3E9 789 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 NTAN1Q96AB6 310 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 C11orf70Q9BRQ4 267 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 CNOT8Q9UFF9 292 aaKnown RBP13.87□□□□□ -0.19
USP44-202ENST00000393091 LAMA3Q16787 3333 aa13.87□□□□□ -0.19
USP44-202ENST00000393091 KCNU1A8MYU2 1149 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 KRT3P12035 628 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 CXCR3P49682 368 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 SPA17Q15506 151 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 ZNF77Q15935 545 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 BRMS1LQ5PSV4 323 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 TMC5Q6UXY8 1006 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 HFE2Q6ZVN8 426 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 MTSS1LQ765P7 747 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 GPR152Q8TDT2 470 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 GOLGA1Q92805 767 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 TCEAL4Q96EI5 215 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 SERPINB11Q96P15 392 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 CNPY3Q9BT09 278 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 DOCK6Q96HP0 2047 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 ZNF487B1APH4 448 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 ATP5C1P36542 298 aaKnown RBP13.86□□□□□ -0.19
USP44-202ENST00000393091 ZNF252P-AS1Q0IIN9 211 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 CCDC14Q49A88 953 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 DNAJC24Q6P3W2 148 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 ITFG1Q8TB96 612 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 OTUB2Q96DC9 234 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.86□□□□□ -0.19
USP44-202ENST00000393091 SPTLC3Q9NUV7 552 aa13.86□□□□□ -0.19
USP44-202ENST00000393091 E2F8A0AVK6 867 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 IRAK2O43187 625 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 LAMP2P13473 410 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 SSTR3P32745 418 aaPredicted RBP13.85□□□□□ -0.19
USP44-202ENST00000393091 FCHO2Q0JRZ9 810 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 PIGHQ14442 188 aaPredicted RBP13.85□□□□□ -0.19
USP44-202ENST00000393091 TEAD2Q15562 447 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 OR6B2Q6IFH4 312 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 ZNF653Q96CK0 615 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 TLR5O60602 858 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 GPD1P21695 349 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 HTR7P34969 479 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 MAGEA1P43355 309 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 MTF1Q14872 753 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 BTBD8Q5XKL5 378 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 CPXM2Q8N436 756 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 DQX1Q8TE96 717 aaKnown RBP13.85□□□□□ -0.19
USP44-202ENST00000393091 CTNNBL1Q8WYA6 563 aaPredicted RBP13.85□□□□□ -0.19
USP44-202ENST00000393091 FGF13Q92913 245 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 SMARCD2Q92925 531 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 ARHGEF26Q96DR7 871 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 FCRL2Q96LA5 508 aaPredicted RBP13.85□□□□□ -0.19
USP44-202ENST00000393091 C1orf74Q96LT6 269 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 SELENOOQ9BVL4 669 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 DCLK3Q9C098 648 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 RNF38Q9H0F5 515 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 PIDD1Q9HB75 910 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 THEGQ9P2T0 379 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 IP6K2Q9UHH9 426 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 STAP1Q9ULZ2 295 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 MRPS23Q9Y3D9 190 aaKnown RBP13.85□□□□□ -0.19
USP44-202ENST00000393091 SLC2A3P11169 496 aa13.85□□□□□ -0.19
USP44-202ENST00000393091 ZNF135P52742 658 aaPredicted RBP13.85□□□□□ -0.19
USP44-202ENST00000393091 FAM102AQ5T9C2 384 aaPredicted RBP13.85□□□□□ -0.19
USP44-202ENST00000393091 CELF5Q8N6W0 485 aaKnown RBP13.85□□□□□ -0.19
USP44-202ENST00000393091 METTL5Q9NRN9 209 aaKnown RBP13.85□□□□□ -0.19
USP44-202ENST00000393091 MUC22E2RYF6 1773 aaPredicted RBP13.84□□□□□ -0.19
USP44-202ENST00000393091 A0A1W2PRU2 124 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 C2orf78A6NCI8 922 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 GBP1P32455 592 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 SLC1A1P43005 524 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 COG7P83436 770 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 HTR4Q13639 388 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 LRRC38Q5VT99 294 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 DEFB106AQ8N104 65 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 MYADMQ96S97 322 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 PACSIN1Q9BY11 444 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 SYNCQ9H7C4 482 aa13.84□□□□□ -0.19
USP44-202ENST00000393091 MYL4P12829 197 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms