RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 TAF5Q15542 800 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 GRIK4Q16099 956 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 ZNF792Q3KQV3 632 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 PPP6R3Q5H9R7 873 aaPredicted RBP11.26□□□□□ -0.61
BRF1-204ENST00000392557 ISLR2Q6UXK2 745 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 SESTD1Q86VW0 696 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 C1orf127Q8N9H9 656 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 JOSD2Q8TAC2 188 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 VCPIP1Q96JH7 1222 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 MS4A4AQ96JQ5 239 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 SERAC1Q96JX3 654 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 HEXIM2Q96MH2 286 aaKnown RBP11.26□□□□□ -0.61
BRF1-204ENST00000392557 ACSS3Q9H6R3 686 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 LRCH1Q9Y2L9 728 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 SPECC1L-ADORA2AF8WAN1 911 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 TM9SF1O15321 606 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 KCNN4O15554 427 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 SP100P23497 879 aaPredicted RBP11.26□□□□□ -0.61
BRF1-204ENST00000392557 SERPINB6P35237 376 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 AP3M2P53677 418 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 ROR1Q01973 937 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 MMRN1Q13201 1228 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 EFHC2Q5JST6 749 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 ZNF484Q5JVG2 852 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 LGSNQ5TDP6 509 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 DENND1BQ6P3S1 775 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 TDRPQ86YL5 185 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 UBA3Q8TBC4 463 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 ALKBH8Q96BT7 664 aaKnown RBP11.26□□□□□ -0.61
BRF1-204ENST00000392557 SRPK1Q96SB4 655 aaKnown RBP11.26□□□□□ -0.61
BRF1-204ENST00000392557 ADPGKQ9BRR6 497 aa11.26□□□□□ -0.61
BRF1-204ENST00000392557 ABLIM1O14639 778 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 NDC80O14777 642 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 HNRNPCL1O60812 293 aaKnown RBP11.25□□□□□ -0.61
BRF1-204ENST00000392557 ITGAVP06756 1048 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 AMPD1P23109 780 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 IZUMO2Q6UXV1 221 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 CATSPER4Q7RTX7 472 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 CRLF3Q8IUI8 442 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 EGFL6Q8IUX8 553 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 TTC13Q8NBP0 860 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 SHCBP1Q8NEM2 672 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 VPS11Q9H270 941 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 VTA1Q9NP79 307 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 NGRNQ9NPE2 291 aaKnown RBP11.25□□□□□ -0.61
BRF1-204ENST00000392557 NDE1Q9NXR1 346 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 ZC3H7BQ9UGR2 993 aaKnown RBP11.25□□□□□ -0.61
BRF1-204ENST00000392557 ANGPTL2Q9UKU9 493 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 NUMBLQ9Y6R0 609 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 TCRBV9S1A1TA0A576 114 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 CYB561D2O14569 222 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 USP1O94782 785 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 ACADSP16219 412 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 FAM102AQ5T9C2 384 aaPredicted RBP11.25□□□□□ -0.61
BRF1-204ENST00000392557 MTHFD1LQ6UB35 978 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 CCNJLQ8IV13 435 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 E2F7Q96AV8 911 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 MAML3Q96JK9 1138 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 OSMRQ99650 979 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 TINF2Q9BSI4 451 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 PDZD7Q9H5P4 517 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 EURLQ9NYK6 297 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 MAGED2Q9UNF1 606 aaPredicted RBP11.25□□□□□ -0.61
BRF1-204ENST00000392557 TNFSF13BQ9Y275 285 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 DRG1Q9Y295 367 aaKnown RBP11.25□□□□□ -0.61
BRF1-204ENST00000392557 M0QYV0 167 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 CYP2B6P20813 491 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 ASPAP45381 313 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 HUNKP57058 714 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 TMEM132DQ14C87 1099 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 OASLQ15646 514 aaKnown RBP11.25□□□□□ -0.61
BRF1-204ENST00000392557 AMHR2Q16671 573 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 RGS9BPQ6ZS82 235 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 PLEKHH3Q7Z736 793 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 NDUFAF2Q8N183 169 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 POU5F2Q8N7G0 328 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 BANPQ8N9N5 519 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 PPTC7Q8NI37 304 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 NPLOC4Q8TAT6 608 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 SLC26A7Q8TE54 656 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 MTBPQ96DY7 904 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 ZNF333Q96JL9 665 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 ANKRD27Q96NW4 1050 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 TWNKQ96RR1 684 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 PTPN18Q99952 460 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.25□□□□□ -0.61
BRF1-204ENST00000392557 SIX4Q9UIU6 781 aa11.25□□□□□ -0.61
BRF1-204ENST00000392557 LOC100653049A0A140TA62 436 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 LIN7AO14910 233 aaPredicted RBP11.24□□□□□ -0.61
BRF1-204ENST00000392557 KRT34O76011 436 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 NPTXRO95502 500 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 ZBED1O96006 694 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 OR6B2Q6IFH4 312 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 ADGRD1Q6QNK2 874 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 HPDLQ96IR7 371 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 C16orf70Q9BSU1 422 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 XYLT2Q9H1B5 865 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 PTPRHQ9HD43 1115 aa11.24□□□□□ -0.61
BRF1-204ENST00000392557 GPATCH2LQ9NWQ4 482 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms