RNA–Protein interactions for RNA: ENST00000390964.1

SNORA40.3-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 122 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.3-201ENST00000390964 GDF15Q99988 308 aa4.3□□□□□ -1.72
SNORA40.3-201ENST00000390964 QTRT1Q9BXR0 403 aaKnown RBP4.3□□□□□ -1.72
SNORA40.3-201ENST00000390964 AS3MTQ9HBK9 375 aa4.3□□□□□ -1.72
SNORA40.3-201ENST00000390964 ARNT2Q9HBZ2 717 aa4.3□□□□□ -1.72
SNORA40.3-201ENST00000390964 RXFP3Q9NSD7 469 aa4.3□□□□□ -1.72
SNORA40.3-201ENST00000390964 ZNF70Q9UC06 446 aaPredicted RBP4.3□□□□□ -1.72
SNORA40.3-201ENST00000390964 FZD4Q9ULV1 537 aa4.3□□□□□ -1.72
SNORA40.3-201ENST00000390964 MAFFQ9ULX9 164 aa4.3□□□□□ -1.72
SNORA40.3-201ENST00000390964 BTBD3Q9Y2F9 522 aa4.3□□□□□ -1.72
SNORA40.3-201ENST00000390964 SPATA31A1Q5TZJ5 1347 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 SMIM35A0A1B0GVV1 85 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 WDR91A4D1P6 747 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 OR2W5A6NFC9 320 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 RASA4BC9J798 803 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 RASA4O43374 803 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 CBFA2T3O75081 653 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 FGF18O76093 207 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 TNFSF4P23510 183 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 MST1P26927 711 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 GABRB3P28472 473 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 AK2P54819 239 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 TBX4P57082 545 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 GPC5P78333 572 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 CCDC15Q0P6D6 951 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 GPS1Q13098 491 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 KCNJ12Q14500 433 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 KCNB1Q14721 858 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 MFSD13AQ14CX5 517 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 SLC5A9Q2M3M2 681 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 FAM209BQ5JX69 171 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 CCDC181Q5TID7 509 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 GRHL2Q6ISB3 625 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 HIBCHQ6NVY1 386 aaPredicted RBP4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 TLDC1Q6P9B6 456 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 CCDC28AQ8IWP9 274 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 FAM118BQ9BPY3 351 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 SH2D3AQ9BRG2 576 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 CINPQ9BW66 212 aaPredicted RBP4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 SLC29A3Q9BZD2 475 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 PRSS22Q9GZN4 317 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 USP29Q9HBJ7 922 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 SEMA5BQ9P283 1151 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 SCAF8Q9UPN6 1271 aaKnown RBP4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 MAN2B2Q9Y2E5 1009 aa4.29□□□□□ -1.72
SNORA40.3-201ENST00000390964 CLIC1O00299 241 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 DSCR3O14972 297 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 CA12O43570 354 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 BCAR3O75815 825 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 RNF8O76064 485 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 MYL3P08590 195 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 EGR1P18146 543 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 PICALMQ13492 652 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 SUPT20HL1Q3ZLR7 823 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 AASDHQ4L235 1098 aaPredicted RBP4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 IZUMO3Q5VZ72 239 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 RANBP10Q6VN20 620 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 P3H2Q8IVL5 708 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 TXLNBQ8N3L3 684 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 OR2C3Q8N628 320 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 SMG7Q92540 1137 aaKnown RBP4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 RPL36ALQ969Q0 106 aaKnown RBP4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 HIC2Q96JB3 615 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 RIPOR3Q96MK2 946 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 EFHD1Q9BUP0 239 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 PCDHAC1Q9H158 963 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 PDGFCQ9NRA1 345 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 VPS45Q9NRW7 570 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 GJB4Q9NTQ9 266 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 ZMYND8Q9ULU4 1186 aaPredicted RBP4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 PHTF1Q9UMS5 762 aa4.28□□□□□ -1.72
SNORA40.3-201ENST00000390964 HNRNPDLO14979 420 aaKnown RBP4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 FYB1O15117 783 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 PRAMEF2O60811 474 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 NDST3O95803 873 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 TMIGD3P0DMS9 266 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 SFPQP23246 707 aaKnown RBP eCLIP4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 LMO1P25800 156 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 PBX1P40424 430 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 ZNF81P51508 661 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 PMS2P11Q13670 270 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 ATP1A4Q13733 1029 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 ZNF268Q14587 947 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 TRIP6Q15654 476 aaKnown RBP4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 LONRF1Q17RB8 773 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 RAP1GAP2Q684P5 730 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 ZNF425Q6IV72 752 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 GLIS1Q8NBF1 620 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 OSR1Q8TAX0 266 aaPredicted RBP4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 OVCA2Q8WZ82 227 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 CCDC138Q96M89 665 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 ZNF778Q96MU6 729 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 NUDT22Q9BRQ3 303 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 TMEM8AQ9HCN3 771 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 RGL1Q9NZL6 768 aa4.27□□□□□ -1.73
SNORA40.3-201ENST00000390964 E5RJQ4 531 aa4.26□□□□□ -1.73
SNORA40.3-201ENST00000390964 FCHO1O14526 889 aa4.26□□□□□ -1.73
SNORA40.3-201ENST00000390964 ZSCAN9O15535 394 aaPredicted RBP4.26□□□□□ -1.73
SNORA40.3-201ENST00000390964 NCK2O43639 380 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms