RNA–Protein interactions for RNA: ENST00000389805.8

SQSTM1-202, Transcript of sequestosome 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQSTM1, Length 2,986 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-202ENST00000389805 NFICP08651 508 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 AQP4P55087 323 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 PRKD1Q15139 912 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 RCOR2Q8IZ40 523 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 SMC1BQ8NDV3 1235 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 SERAC1Q96JX3 654 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 FAM167AQ96KS9 214 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 TMCO1Q9UM00 188 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 ASLP04424 464 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 BBS9Q3SYG4 887 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 RNASEH2BQ5TBB1 312 aaKnown RBP18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 SPOCD1Q6ZMY3 1216 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 DPH6Q7L8W6 267 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 NET1Q7Z628 596 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 ARID3BQ8IVW6 561 aaPredicted RBP18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 TWNKQ96RR1 684 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 SDCBP2Q9H190 292 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 HSFX1Q9UBD0 423 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 SIX4Q9UIU6 781 aa18.36■□□□□ 0.53
SQSTM1-202ENST00000389805 SIP14410 1827 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 PAPPA2Q9BXP8 1791 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 ACKR2O00590 384 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 BUD23O43709 281 aaKnown RBP18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 MAGEC1O60732 1142 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 TM7SF2O76062 418 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 CALB1P05937 261 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 ITGA2BP08514 1039 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 MAP7Q14244 749 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 KCTD2Q14681 263 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 TSHZ1Q6ZSZ6 1077 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 NME8Q8N427 588 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 ARFGAP1Q8N6T3 406 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 CCDC124Q96CT7 223 aaKnown RBP18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 PLEKHG4BQ96PX9 1271 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 CDT1Q9H211 546 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 F8W8V4 182 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 PABPC4LP0CB38 370 aaKnown RBP18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 IMPDH2P12268 514 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 PROZP22891 400 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 ASPHQ12797 758 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 TRMT5Q32P41 509 aaKnown RBP18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 HSF5Q4G112 596 aaPredicted RBP18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 PALM2Q8IXS6 379 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 EFCAB3Q8N7B9 438 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.35■□□□□ 0.531e-7■□□□□ 10.8
SQSTM1-202ENST00000389805 FBXO36Q8NEA4 188 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 SLC26A7Q8TE54 656 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 MMP19Q99542 508 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 SHCBP1LQ9BZQ2 653 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 FOXP3Q9BZS1 431 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 FZD8Q9H461 694 aa18.35■□□□□ 0.53
SQSTM1-202ENST00000389805 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 PRR5-ARHGAP8B1AHC4 643 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 SPECC1L-ADORA2AF8WAN1 911 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 PDLIM1O00151 329 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 PIK3R2O00459 728 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 TM9SF1O15321 606 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 ATP6V1G1O75348 118 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 IL1R2P27930 398 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 AP3M2P53677 418 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 EPHB1P54762 984 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 ARHGAP8P85298 464 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 SLC25A3Q00325 362 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 UBAP2LQ14157 1087 aaKnown RBP18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 ADGRD1Q6QNK2 874 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 RNF111Q6ZNA4 994 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 ALLCQ8N6M5 410 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 SNRNP27Q8WVK2 155 aaKnown RBP18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 CPB2Q96IY4 423 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 RILPQ96NA2 401 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 MAF1Q9H063 256 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 TNNC2P02585 160 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 PEX2P28328 305 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 MORF4L2Q15014 288 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 ACBD5Q5T8D3 534 aaPredicted RBP18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 ACAD11Q709F0 780 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 C1orf127Q8N9H9 656 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 MZB1Q8WU39 189 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 ACAP3Q96P50 834 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 WDR83Q9BRX9 315 aaKnown RBP18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 PLA2G4CQ9UP65 541 aa18.34■□□□□ 0.53
SQSTM1-202ENST00000389805 PENKP01210 267 aaPredicted RBP18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 CD48P09326 243 aa18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 IREB2P48200 963 aaKnown RBP18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 PDE1BQ01064 536 aa18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 MBTD1Q05BQ5 628 aa18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 TMEM62Q0P6H9 643 aa18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 PLPPR4Q7Z2D5 763 aa18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 DCAKDQ8WVC6 231 aa18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 LENG1Q96BZ8 264 aaPredicted RBP18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 ANKRD36BP1Q96IX9 119 aa18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 CPXM1Q96SM3 734 aa18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 PCSK1NQ9UHG2 260 aa18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 MGAMO43451 1857 aa18.33■□□□□ 0.53
SQSTM1-202ENST00000389805 LACTBL1A8MY62 500 aa18.33■□□□□ 0.52
SQSTM1-202ENST00000389805 LSM8O95777 96 aaKnown RBP18.33■□□□□ 0.52
SQSTM1-202ENST00000389805 ITGB3P05106 788 aa18.33■□□□□ 0.52
SQSTM1-202ENST00000389805 PSMA2P25787 234 aa18.33■□□□□ 0.52
SQSTM1-202ENST00000389805 FAAP100Q0VG06 881 aa18.33■□□□□ 0.52
SQSTM1-202ENST00000389805 GRM1Q13255 1194 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms