RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 IKBKGQ9Y6K9 419 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 SGK1O00141 431 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 ITGAVP06756 1048 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 TSHRP16473 764 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 ITGAXP20702 1163 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 NUP107P57740 925 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 CDKL1Q00532 357 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 MTM1Q13496 603 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 PSMD6Q15008 389 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 ZNF423Q2M1K9 1284 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 MFSD7Q6UXD7 560 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 SAMD7Q7Z3H4 446 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 NUDCD3Q8IVD9 361 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 RCOR2Q8IZ40 523 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 NAT8LQ8N9F0 302 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 ZSWIM2Q8NEG5 633 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 SLITRK1Q96PX8 696 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 CLEC11AQ9Y240 323 aa15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 FAM32AQ9Y421 112 aaKnown RBP15.18■□□□□ 0.02
VPS9D1-201ENST00000389386 CYB561D2O14569 222 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 TRPA1O75762 1119 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 INHBAP08476 426 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 GSTT2P0CG29 244 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 GSTT2BP0CG30 244 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 ATF7P17544 494 aaPredicted RBP15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 STAT2P52630 851 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 MAP7D1Q3KQU3 841 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 BBS9Q3SYG4 887 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 RARS2Q5T160 578 aaKnown RBP15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 TPH2Q8IWU9 490 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 TSPAN14Q8NG11 270 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 SNX27Q96L92 541 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 RANBP9Q96S59 729 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 NEURL2Q9BR09 285 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 CIITAP33076 1130 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 TRIM50Q86XT4 487 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 IGDCC3Q8IVU1 814 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 TRIM11Q96F44 468 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 CBWD1Q9BRT8 395 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 HAUS8Q9BT25 410 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 EXOC7Q9UPT5 735 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 MYPNQ86TC9 1320 aa15.17■□□□□ 0.02
VPS9D1-201ENST00000389386 FAM155BO75949 473 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 L1CAMP32004 1257 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 BCAP31P51572 246 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 MRPS5P82675 430 aaKnown RBP15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 PDK1Q15118 436 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 TMEM126BQ8IUX1 230 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 CATSPER1Q8NEC5 780 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 ITPKCQ96DU7 683 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 LRGUKQ96M69 825 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 SYT17Q9BSW7 474 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 SHCBP1LQ9BZQ2 653 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 PKD2L1Q9P0L9 805 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 ZBTB21Q9ULJ3 1066 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 TCRBV9S1A1TA0A576 114 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 WNT10BO00744 389 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 SIN3BO75182 1162 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 AP3B2Q13367 1082 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 ADGRE1Q14246 886 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 TBC1D10BQ4KMP7 808 aaPredicted RBP15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 DCDC5Q6ZRR9 648 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 TRIML2Q8N7C3 387 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 ADCY4Q8NFM4 1077 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 TFB1MQ8WVM0 346 aaKnown RBP15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 SLC38A7Q9NVC3 462 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 NUB1Q9Y5A7 615 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 ZNF536O15090 1300 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 CNTNAP1P78357 1384 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 TCRBV7S3A2A0A539 114 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 TRIM49D1C9J1S8 452 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 PPARGP37231 505 aaPredicted RBP15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 GMPSP49915 693 aaPredicted RBP15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 TRMT1LQ7Z2T5 733 aaKnown RBP15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 RAB3IL1Q8TBN0 382 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 DHRS1Q96LJ7 313 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 NRDE2Q9H7Z3 1164 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 TUFT1Q9NNX1 390 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 TBC1D23Q9NUY8 699 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 RAB20Q9NX57 234 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 IGSF9Q9P2J2 1179 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 HERC5Q9UII4 1024 aaKnown RBP15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 RIMS3Q9UJD0 308 aa15.16■□□□□ 0.02
VPS9D1-201ENST00000389386 ZNF541Q9H0D2 1346 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 FUCA1P04066 466 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 TCF4P15884 667 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 PRDX6P30041 224 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 SREBF1P36956 1147 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 STX3Q13277 289 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 SLC2A7Q6PXP3 512 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 MON1BQ7L1V2 547 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 XXYLT1Q8NBI6 393 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 TMEM174Q8WUU8 243 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 ELMO3Q96BJ8 720 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 APOL6Q9BWW8 343 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 INO80BQ9C086 356 aaPredicted RBP15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 MYOZ2Q9NPC6 264 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 TRIM17Q9Y577 477 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 FAM189A1O60320 539 aa15.15■□□□□ 0.02
VPS9D1-201ENST00000389386 TMEM63AO94886 807 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms