RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 ASB3Q9Y575 518 aa6.05□□□□□ -1.44
ERCC4-202ENST00000389138 BRCA2P51587 3418 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 PNMA6EA0A0J9YXQ4 647 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 A0A1W2PQ09 198 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 PRAMEF22A3QJZ6 481 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 H7C1D1 291 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 TRIM16O95361 564 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CLEC3BP05452 202 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 TPOP07202 933 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 GLI1P08151 1106 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 NPR1P16066 1061 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 DIO1P49895 249 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 TEFQ10587 303 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 HFEQ30201 348 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 ZBTB37Q5TC79 503 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 GARNL3Q5VVW2 1013 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 RRAGBQ5VZM2 374 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 GDF6Q6KF10 455 aaPredicted RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 WDR93Q6P2C0 686 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 IKBIPQ70UQ0 350 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 PPIL6Q8IXY8 311 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 TDRD5Q8NAT2 981 aaKnown RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 ATP6V0A1Q93050 837 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 PGAP3Q96FM1 320 aaPredicted RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 PDLIM5Q96HC4 596 aaKnown RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 SPXQ9BT56 116 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 WDR18Q9BV38 432 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 ADAM7Q9H2U9 754 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 IPPKQ9H8X2 491 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 PRDM8Q9NQV8 689 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 ZDHHC7Q9NXF8 308 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 TJP2Q9UDY2 1190 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 NARFQ9UHQ1 456 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 RIMKLBQ9ULI2 386 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 TBX20Q9UMR3 447 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 PAXBP1Q9Y5B6 917 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CENPFP49454 3210 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 COL4A5P29400 1685 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 TRIM43BA6NCK2 446 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 ISM1B1AKI9 464 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 HNRNPDLO14979 420 aaKnown RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 SCAMP1O15126 338 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 SLC25A17O43808 307 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CEP104O60308 925 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 EIF4EBP3O60516 100 aaPredicted RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 GJB1P08034 283 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 MYL4P12829 197 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 GCH1P30793 250 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 GDI1P31150 447 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 SOX6P35712 828 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 GARSP41250 739 aaKnown RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 MTIF2P46199 727 aaKnown RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CABP4P57796 275 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 SCRN1Q12765 414 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 RPA4Q13156 261 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CUL2Q13617 745 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 SUZ12Q15022 739 aaKnown RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 IMMTQ16891 758 aaKnown RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 C2orf76Q3KRA6 126 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CCDC157Q569K6 752 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 PRAMEF14Q5SWL7 426 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 ANGEL2Q5VTE6 544 aaKnown RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 MBNL2Q5VZF2 373 aaKnown RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CTR9Q6PD62 1173 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 KLHL17Q6TDP4 642 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 ZYG11AQ6WRX3 759 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 RABEPKQ7Z6M1 372 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 TUSC5Q8IXB3 177 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 GPC2Q8N158 579 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 PDCL2Q8N4E4 241 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 ANKRD20A12PQ8NF67 263 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 SPATA20Q8TB22 786 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 TRIM43Q96BQ3 446 aaPredicted RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 VWCEQ96DN2 955 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 NLRP4Q96MN2 994 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CITED2Q99967 270 aaPredicted RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 BOCQ9BWV1 1114 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 FAM129AQ9BZQ8 928 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 MKRN2Q9H000 416 aaKnown RBP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 KRT82Q9NSB4 513 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 EXOC1Q9NV70 894 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 AATFQ9NY61 560 aaKnown RBP eCLIP6.04□□□□□ -1.44
ERCC4-202ENST00000389138 PSD3Q9NYI0 1048 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 LPAR3Q9UBY5 353 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 ADAM30Q9UKF2 790 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CAMK2AQ9UQM7 478 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 KIF3AQ9Y496 699 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 CSADQ9Y600 493 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 FHOD1Q9Y613 1164 aa6.04□□□□□ -1.44
ERCC4-202ENST00000389138 ZNF804BA4D1E1 1349 aa6.03□□□□□ -1.44
ERCC4-202ENST00000389138 HTTP42858 3142 aa6.03□□□□□ -1.44
ERCC4-202ENST00000389138 CCDC169A6NNP5 214 aa6.03□□□□□ -1.44
ERCC4-202ENST00000389138 A8MV72 311 aaPredicted RBP6.03□□□□□ -1.44
ERCC4-202ENST00000389138 RBAK-RBAKDNI3L0D1 243 aa6.03□□□□□ -1.44
ERCC4-202ENST00000389138 TGFB1I1O43294 461 aa6.03□□□□□ -1.44
ERCC4-202ENST00000389138 MYO1BO43795 1136 aa6.03□□□□□ -1.44
ERCC4-202ENST00000389138 ENTPD3O75355 529 aa6.03□□□□□ -1.44
ERCC4-202ENST00000389138 DDHD2O94830 711 aa6.03□□□□□ -1.44
ERCC4-202ENST00000389138 TK1P04183 234 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms