RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 TAF6P49848 677 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 GATMP50440 423 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 JAK3P52333 1124 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 ITGA8P53708 1063 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 BCAT1P54687 386 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 SLC12A2P55011 1212 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 WNT3P56703 355 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 TIRAPP58753 221 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 ERVFC1-1P60608 527 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 GPC5P78333 572 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 NKX6-1P78426 367 aaPredicted RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 EGR4Q05215 589 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 GAD2Q05329 585 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 DDR1Q08345 913 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CTBP1Q13363 440 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 SMTNL2Q2TAL5 461 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 SLC4A8Q2Y0W8 1093 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 PGS1Q32NB8 556 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 FAM76BQ5HYJ3 339 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 WASHC2DQ5SRD0 308 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CEP85LQ5SZL2 805 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CERCAMQ5T4B2 595 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 EMC10Q5UCC4 262 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 SYDE2Q5VT97 1194 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CACHD1Q5VU97 1274 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 LMBRD2Q68DH5 695 aaPredicted RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 SPSB3Q6PJ21 355 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CLEC9AQ6UXN8 241 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 RBM44Q6ZP01 1051 aaKnown RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 USP45Q70EL2 814 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 RTL10Q7L3V2 364 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 KRT26Q7Z3Y9 468 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 KCTD20Q7Z5Y7 419 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 TFAP2DQ7Z6R9 452 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CATIPQ7Z7H3 387 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 RBM23Q86U06 439 aaKnown RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 GAS2L3Q86XJ1 694 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 DDX42Q86XP3 938 aaKnown RBP eCLIP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 PRR18Q8N4B5 295 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 DBF4BQ8NFT6 615 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 BCAS4Q8TDM0 211 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 TMEM174Q8WUU8 243 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 LPAR1Q92633 364 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 MSI2Q96DH6 328 aaKnown RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 EDC3Q96F86 508 aaKnown RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 WDYHV1Q96HA8 205 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 VPS50Q96JG6 964 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 INPP4AQ96PE3 977 aaPredicted RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 P2RX7Q99572 595 aaKnown RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 GATA5Q9BWX5 397 aaPredicted RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 VN1R3Q9BXE9 311 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 TM6SF1Q9BZW5 370 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 TRIM5Q9C035 493 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CDCP1Q9H5V8 836 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 RETREG1Q9H6L5 497 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 AAMDCQ9H7C9 122 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 AGO4Q9HCK5 861 aaKnown RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CD93Q9NPY3 652 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 PAPOLBQ9NRJ5 636 aaKnown RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CNNM1Q9NRU3 951 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 GAR1Q9NY12 217 aaKnown RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 PLK2Q9NYY3 685 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 NCKIPSDQ9NZQ3 722 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 NKX1-2Q9UD57 310 aaPredicted RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 STAP2Q9UGK3 403 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 IPO11Q9UI26 975 aaKnown RBP0.7□□□□□ -2.3
SNORD28-201ENST00000384706 TRHDEQ9UKU6 1024 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 FZD4Q9ULV1 537 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 VPS4AQ9UN37 437 aa0.7□□□□□ -2.3
SNORD28-201ENST00000384706 CKAP5Q14008 2032 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 A0A087WWL8 130 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 A0A0B4J293 547 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 A0A0G2JK05 382 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 A0A1B0GVT2 93 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 DENND3A2RUS2 1198 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PRR23AA6NEV1 266 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 A6NNC1 897 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 BTBD18B2RXH4 712 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 H7C4K7 107 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 AGPSO00116 658 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 GABRDO14764 452 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 SPTLC2O15270 562 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PHGDHO43175 533 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 AKAP10O43572 662 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 AP1G1O43747 822 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PRAMEF2O60811 474 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 KATNA1O75449 491 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 RASSF9O75901 435 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CLSTN1O94985 981 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ZRANB2O95218 330 aaKnown RBP eCLIP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ZBTB11O95625 1053 aaPredicted RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 IGLV2-11P01706 119 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 ALDH2P05091 517 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CYP1A2P05177 515 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 PARP1P09874 1014 aaKnown RBP0.69□□□□□ -2.3
SNORD28-201ENST00000384706 KITP10721 976 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 HGFP14210 728 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 CD19P15391 556 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 TFEBP19484 476 aa0.69□□□□□ -2.3
SNORD28-201ENST00000384706 RPS6KB1P23443 525 aa0.69□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms