RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 SP2Q02086 613 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 RUNX1T1Q06455 604 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 KCNB1Q14721 858 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 SMTNL2Q2TAL5 461 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 TMEM177Q53S58 311 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 TDRD12Q587J7 1177 aaKnown RBP-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 ZBTB41Q5SVQ8 909 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 TMEM63BQ5T3F8 832 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 GPR158Q5T848 1215 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 OTUD1Q5VV17 481 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 YOD1Q5VVQ6 348 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 ICE2Q659A1 982 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 C8orf82Q6P1X6 216 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 PARM1Q6UWI2 310 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 SLC17A8Q8NDX2 589 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 NFAM1Q8NET5 270 aaPredicted RBP-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 OR14C36Q8NHC7 312 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 SECTM1Q8WVN6 248 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 GLG1Q92896 1179 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 SGSM3Q96HU1 749 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 HS6ST2Q96MM7 605 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 ZIM3Q96PE6 472 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 IWS1Q96ST2 819 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 ASCL2Q99929 193 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 TRIM51Q9BSJ1 452 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 RARRES3Q9UL19 164 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 STRIP2Q9ULQ0 834 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 CREBBPQ92793 2442 aa-0.21□□□□□ -2.44
RNU6-540P-201ENST00000384622 A6NNC1 897 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 CCP110O43303 1012 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 PLAUP00749 431 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 PRKCBP05771 671 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 SLC9A1P19634 815 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 KCNA5P22460 613 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 PCSK1P29120 753 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 XGP55808 180 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 POU5F1Q01860 360 aaKnown RBP-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 SNTA1Q13424 505 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 DLGAP5Q15398 846 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 ATP2B3Q16720 1220 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 PFKFB3Q16875 520 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 ZNF776Q68DI1 518 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 ZCCHC12Q6PEW1 402 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 FOXL2NBQ6ZUU3 175 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 ADGRF4Q8IZF3 695 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 SLC39A11Q8N1S5 342 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 RSAD2Q8WXG1 361 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 POM121L2Q96KW2 1035 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 MRPL46Q9H2W6 279 aaKnown RBP-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 TASP1Q9H6P5 420 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 KAT14Q9H8E8 782 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 KRCC1Q9NPI7 259 aaPredicted RBP-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 AMFRQ9UKV5 643 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 GABRQQ9UN88 632 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 NUMBLQ9Y6R0 609 aa-0.22□□□□□ -2.44
RNU6-540P-201ENST00000384622 KIR2DS1A0A191URI9 304 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 PRSS38A1L453 326 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 MCIDASD6RGH6 385 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 DCXO43602 365 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 PPP6R2O75170 966 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 IFNA2P01563 188 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 LCATP04180 440 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 PRSS1P07477 247 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 GPTP24298 496 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 SLC6A4P31645 630 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 HK3P52790 923 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 GAD2Q05329 585 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 KIR2DS1Q14954 304 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 LONRF2Q1L5Z9 754 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 DNTTIP2Q5QJE6 756 aaKnown RBP-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 PIK3CD-AS1Q5SR53 167 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 DACT2Q5SW24 774 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 NSUN5P2Q63ZY6 315 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 TAF2Q6P1X5 1199 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 RTN4RL2Q86UN3 420 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 CADM3Q8N126 398 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 PAQR4Q8N4S7 273 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 IGSF22Q8N9C0 903 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 CNBD1Q8NA66 436 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 PSD4Q8NDX1 1056 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 GPR156Q8NFN8 814 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 FAM216AQ8WUB2 273 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 RIN2Q8WYP3 895 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 CENPIQ92674 756 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 ART5Q96L15 291 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 SPATA32Q96LK8 384 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 ELF4Q99607 663 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 CDX2Q99626 313 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 EBF4Q9BQW3 602 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 ERVMER34-1Q9H9K5 563 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 MYOZ2Q9NPC6 264 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 TOMM22Q9NS69 142 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 PPP1R1BQ9UD71 204 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 CDC14AQ9UNH5 594 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 ZNF256Q9Y2P7 627 aaPredicted RBP-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 FAT4Q6V0I7 4981 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 NCOR1O75376 2440 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 RYR1P21817 5038 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 UBR4Q5T4S7 5183 aa-0.23□□□□□ -2.45
RNU6-540P-201ENST00000384622 BDP1A6H8Y1 2624 aa-0.24□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms