RNA–Protein interactions for RNA: ENST00000384566.1

RNU6-140P-201, Transcript of RNA, U6 small nuclear 140, pseudogene, humanhuman

BASIC

Gene RNU6-140P, Length 108 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-140P-201ENST00000384566 SORCS3Q9UPU3 1222 aa3.4□□□□□ -1.87
RNU6-140P-201ENST00000384566 USP15Q9Y4E8 981 aaPredicted RBP3.4□□□□□ -1.87
RNU6-140P-201ENST00000384566 RSF1Q96T23 1441 aaPredicted RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 LOC105369274A0A096LPK9 316 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 LOC102723532A0A0G2JNH3 316 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 CCDC78A2IDD5 438 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 MYADML2A6NDP7 307 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 ZAR1LA6NP61 321 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 GOLGA6L6A8MZA4 724 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 LEFTY2O00292 366 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 KIAA0355O15063 1070 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 HNRNPRO43390 633 aaKnown RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 ANP32CO43423 234 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 NOBOXO60393 691 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 PLOD3O60568 738 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 TULP3O75386 442 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 SCGB1D1O95968 90 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 CYP21A2P08686 494 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 HSPA1AP0DMV8 641 aaKnown RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 HSPA1BP0DMV9 641 aaKnown RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 TNNT1P13805 278 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 PBX1P40424 430 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 PAFAH1B1P43034 410 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 DGKQP52824 942 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 EPHB4P54760 987 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 RBM6P78332 1123 aaKnown RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 OCA2Q04671 838 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 MESP2Q0VG99 397 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 FOXL1Q12952 345 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 SEMA3BQ13214 749 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 TUBB3Q13509 450 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 EIF4A2Q14240 407 aaKnown RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 SEC23BQ15437 767 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 CD300EQ496F6 205 aaPredicted RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 CBWD5Q5RIA9 395 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 CFAP58Q5T655 872 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 DEPDC1Q5TB30 811 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 SLFN13Q68D06 897 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 CCDC144NLQ6NUI1 221 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 DENND1BQ6P3S1 775 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 KRT27Q7Z3Y8 459 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 RAB11FIP4Q86YS3 637 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 MAPKAPK5Q8IW41 473 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 DIS3L2Q8IYB7 885 aaKnown RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 ADGRG5Q8IZF4 528 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 OR4N4Q8N0Y3 316 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 C11orf44Q8N8P7 122 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 FAM71DQ8N9W8 422 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 SLC2A12Q8TD20 617 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 MCRS1Q96EZ8 462 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 RBM17Q96I25 401 aaKnown RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 FAR2Q96K12 515 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 FAM84AQ96KN4 292 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 PPP1R10Q96QC0 940 aaKnown RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 PIGSQ96S52 555 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 ZSWIM1Q9BR11 485 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 C17orf80Q9BSJ5 609 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 CENPOQ9BU64 300 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 RMI1Q9H9A7 625 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 FBXO28Q9NVF7 368 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 HAUS2Q9NVX0 235 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 TBC1D14Q9P2M4 693 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 KCNE5Q9UJ90 142 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 VPS28Q9UK41 221 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 RIMKLBQ9ULI2 386 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 SUFUQ9UMX1 484 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 DRG1Q9Y295 367 aaKnown RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 GDAQ9Y2T3 454 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 UBE2J1Q9Y385 318 aaPredicted RBP3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 SNX14Q9Y5W7 946 aa3.39□□□□□ -1.87
RNU6-140P-201ENST00000384566 MBD3L5A6NJ08 208 aaPredicted RBP3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 H3BNC9 293 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 TSPAN4O14817 238 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 RAD17O75943 681 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 F9P00740 461 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 KRT1P04264 644 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 SLC3A2P08195 630 aaKnown RBP3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 TMEM225BP0DP42 221 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 ACADMP11310 421 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 DRD1P21728 446 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 PSMA4P25789 261 aaKnown RBP3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 APOBEC3AP31941 199 aaPredicted RBP3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 MSX2P35548 267 aaPredicted RBP3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 COPB2P35606 906 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 IRAK1P51617 712 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 RABGGTBP53611 331 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 RNASE9P60153 205 aaKnown RBP3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 EIF4A1P60842 406 aaKnown RBP3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 HHEXQ03014 270 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 RNASELQ05823 741 aaKnown RBP3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 MTAPQ13126 283 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 CUL4AQ13619 759 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 KCNJ12Q14500 433 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 NFIL3Q16649 462 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 ST3GAL2Q16842 350 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 AAK1Q2M2I8 961 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 VMACQ2NL98 169 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 TBC1D10BQ4KMP7 808 aaPredicted RBP3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 MFSD4BQ5TF39 518 aa3.38□□□□□ -1.87
RNU6-140P-201ENST00000384566 SNX30Q5VWJ9 437 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms