RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 EPHA7Q15375 998 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 ARID3BQ8IVW6 561 aaPredicted RBP12.78□□□□□ -0.36
CHD3-203ENST00000380358 REXO5Q96IC2 774 aaKnown RBP12.78□□□□□ -0.36
CHD3-203ENST00000380358 TAAR1Q96RJ0 339 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 MKNK1Q9BUB5 465 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 GPRC5CQ9NQ84 441 aa12.78□□□□□ -0.36
CHD3-203ENST00000380358 GPR182O15218 404 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 TAL1P17542 331 aaPredicted RBP12.77□□□□□ -0.36
CHD3-203ENST00000380358 COMTP21964 271 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 STRIP1Q5VSL9 837 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 CES3Q6UWW8 571 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 AGMOQ6ZNB7 445 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 C2orf73Q8N5S3 287 aaPredicted RBP12.77□□□□□ -0.36
CHD3-203ENST00000380358 TSPAN14Q8NG11 270 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 ZNRF3Q9ULT6 936 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 HEG1Q9ULI3 1381 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 FAM220BPB1ANY3 271 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 TPD52L2O43399 206 aaKnown RBP12.77□□□□□ -0.36
CHD3-203ENST00000380358 ATP1A4Q13733 1029 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 NAPEPLDQ6IQ20 393 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 MRNIPQ6NTE8 343 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 GALNTL5Q7Z4T8 443 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 FAM131BQ86XD5 332 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 KCNK16Q96T55 309 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 TINF2Q9BSI4 451 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 EMILIN2Q9BXX0 1053 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 CERS4Q9HA82 394 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 CTNNAL1Q9UBT7 734 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 DNAJC16Q9Y2G8 782 aa12.77□□□□□ -0.36
CHD3-203ENST00000380358 SNTNA6NMZ2 147 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 TRIM49D1C9J1S8 452 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 PTGES3LE9PB15 166 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 PPP2R1BP30154 601 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 MAGEA10P43363 369 aaPredicted RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 IRX1P78414 480 aaPredicted RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 DMTNQ08495 405 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 DHRS1Q96LJ7 313 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 MYOZ2Q9NPC6 264 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 LCMT1Q9UIC8 334 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 RCOR1Q9UKL0 485 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 OR10H2O60403 315 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 SCN2BO60939 215 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 PHF2O75151 1096 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 EYA4O95677 639 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 ARL3P36405 182 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 CDC73Q6P1J9 531 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 RIPOR1Q6ZS17 1223 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 ATG4AQ8WYN0 398 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 SKA1Q96BD8 255 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 FAM120BQ96EK7 910 aaKnown RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 MRPL48Q96GC5 212 aaKnown RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 DLGAP2Q9P1A6 1054 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 ZNF70Q9UC06 446 aaPredicted RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 FZD1Q9UP38 647 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 GRIN2AQ12879 1464 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 NR3C2P08235 984 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 SNRPAP09012 282 aaKnown RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 ACADSBP45954 432 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 AP3M2P53677 418 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 CYP4F2P78329 520 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 CYP4F3Q08477 520 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 NDUFAF6Q330K2 333 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 FAM171A1Q5VUB5 890 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 CHPFQ8IZ52 775 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 EMID1Q96A84 441 aaPredicted RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 IRX2Q9BZI1 471 aaPredicted RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 ARMC7Q9H6L4 198 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 CLEC4AQ9UMR7 237 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 FAM205CA6NFA0 338 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 FAM187AA6NFU0 413 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 PSMD9O00233 223 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 TRIM24O15164 1050 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 MTA2O94776 668 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 RBP3P10745 1247 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 ALOX12P18054 663 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 NFKB1P19838 968 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 ACAP2Q15057 778 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 SETMARQ53H47 684 aaPredicted RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 PPM1LQ5SGD2 360 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 SRBD1Q8N5C6 995 aaKnown RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 ATG4CQ96DT6 458 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 TRNT1Q96Q11 434 aaKnown RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 OSMRQ99650 979 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 CLEC4MQ9H2X3 399 aaPredicted RBP12.77□□□□□ -0.37
CHD3-203ENST00000380358 TMEM138Q9NPI0 162 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 SPG21Q9NZD8 308 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 PAK5Q9P286 719 aa12.77□□□□□ -0.37
CHD3-203ENST00000380358 TRBV23OR9-2A0A075B6M9 112 aa12.76□□□□□ -0.37
CHD3-203ENST00000380358 MEI4A8MW99 385 aa12.76□□□□□ -0.37
CHD3-203ENST00000380358 CNOT3O75175 753 aaKnown RBP12.76□□□□□ -0.37
CHD3-203ENST00000380358 PSIP1O75475 530 aaKnown RBP12.76□□□□□ -0.37
CHD3-203ENST00000380358 DBIP07108 87 aaKnown RBP12.76□□□□□ -0.37
CHD3-203ENST00000380358 STRA8Q7Z7C7 330 aa12.76□□□□□ -0.37
CHD3-203ENST00000380358 NRSN1Q8IZ57 195 aa12.76□□□□□ -0.37
CHD3-203ENST00000380358 DPY30Q9C005 99 aa12.76□□□□□ -0.37
CHD3-203ENST00000380358 RIBC2Q9H4K1 309 aa12.76□□□□□ -0.37
CHD3-203ENST00000380358 GULP1Q9UBP9 304 aa12.76□□□□□ -0.37
CHD3-203ENST00000380358 GSAPA4D1B5 854 aa12.76□□□□□ -0.37
CHD3-203ENST00000380358 SLC25A12O75746 678 aa12.76□□□□□ -0.37
CHD3-203ENST00000380358 FMO5P49326 533 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms