RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 DBNDD1Q9H9R9 158 aa12.58□□□□□ -0.39
HERC6-203ENST00000380265 RBAKQ9NYW8 714 aaPredicted RBP12.58□□□□□ -0.39
HERC6-203ENST00000380265 SH3GLB1Q9Y371 365 aa12.58□□□□□ -0.39
HERC6-203ENST00000380265 DNAJA2O60884 412 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 SPAG6O75602 509 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 CDH6P55285 790 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 SNRPFP62306 86 aaKnown RBP12.58□□□□□ -0.4
HERC6-203ENST00000380265 MMRN1Q13201 1228 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 TAF5Q15542 800 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 GRAMD4Q6IC98 578 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 PRR5LQ6MZQ0 368 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 SLC39A4Q6P5W5 647 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 LPCAT2Q7L5N7 544 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 LDHDQ86WU2 507 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 PHTF2Q8N3S3 785 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 GAB3Q8WWW8 586 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 NRDE2Q9H7Z3 1164 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 TIMMDC1Q9NPL8 285 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 SIRPGQ9P1W8 387 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 CCPG1Q9ULG6 757 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 DOLKQ9UPQ8 538 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 NUB1Q9Y5A7 615 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 PCDHGA4Q9Y5G9 962 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 E7ESA3 106 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 ZBED1O96006 694 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 CSH1P0DML2 217 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 CSH2P0DML3 217 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 ITGAXP20702 1163 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 KDELR1P24390 212 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 PSMC1P62191 440 aaKnown RBP12.58□□□□□ -0.4
HERC6-203ENST00000380265 LRRC38Q5VT99 294 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 ANGEL2Q5VTE6 544 aaKnown RBP12.58□□□□□ -0.4
HERC6-203ENST00000380265 NXNQ6DKJ4 435 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 TRMT10BQ6PF06 316 aaKnown RBP12.58□□□□□ -0.4
HERC6-203ENST00000380265 KLHL35Q6PF15 583 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 PGBD4Q96DM1 585 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 TXNDC16Q9P2K2 825 aa12.58□□□□□ -0.4
HERC6-203ENST00000380265 AGO2Q9UKV8 859 aaKnown RBP12.58□□□□□ -0.4
HERC6-203ENST00000380265 KDM4FA0A1W2PPD8 638 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 BBS12Q6ZW61 710 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 DDI1Q8WTU0 396 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 EME1Q96AY2 570 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 ATXN7L3BQ96GX2 97 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 SERPINI1Q99574 410 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 ZNF219Q9P2Y4 722 aaPredicted RBP12.57□□□□□ -0.4
HERC6-203ENST00000380265 PSMD13Q9UNM6 376 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 ZNF536O15090 1300 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 PIK3R2O00459 728 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 HSPA4LO95757 839 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 FUT4P22083 530 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 IL1R2P27930 398 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 MPP3Q13368 585 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 ZACNQ401N2 412 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 C15orf52Q6ZUT6 534 aaKnown RBP12.57□□□□□ -0.4
HERC6-203ENST00000380265 JOSD2Q8TAC2 188 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 ACTRT2Q8TDY3 377 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 CDRT15Q96T59 188 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 SF3B1O75533 1304 aaKnown RBP eCLIP12.57□□□□□ -0.4
HERC6-203ENST00000380265 LRRIQ4A6NIV6 560 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 RFPL1O75677 317 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 SLC5A2P31639 672 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 NR1H2P55055 460 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
HERC6-203ENST00000380265 TEX44Q53QW1 395 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 POTEAQ6S8J7 498 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 CHURC1Q8WUH1 139 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 ZBTB45Q96K62 511 aaPredicted RBP12.57□□□□□ -0.4
HERC6-203ENST00000380265 COA1Q9GZY4 146 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 RNPEPQ9H4A4 650 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 PIH1D1Q9NWS0 290 aaKnown RBP12.57□□□□□ -0.4
HERC6-203ENST00000380265 SEPT9Q9UHD8 586 aaPredicted RBP12.57□□□□□ -0.4
HERC6-203ENST00000380265 SORCS3Q9UPU3 1222 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 CTDP1Q9Y5B0 961 aaPredicted RBP12.57□□□□□ -0.4
HERC6-203ENST00000380265 TEX264Q9Y6I9 313 aa12.57□□□□□ -0.4
HERC6-203ENST00000380265 COX4I1P13073 169 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 PSMC3P17980 439 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 WNT7BP56706 349 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 YWHAZP63104 245 aaKnown RBP12.56□□□□□ -0.4
HERC6-203ENST00000380265 JAG1P78504 1218 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 CCDC142Q17RM4 750 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 FSCBQ5H9T9 825 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 PTAR1Q7Z6K3 402 aaPredicted RBP12.56□□□□□ -0.4
HERC6-203ENST00000380265 PATL1Q86TB9 770 aaKnown RBP12.56□□□□□ -0.4
HERC6-203ENST00000380265 ARL10Q8N8L6 244 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 GMCL1P1Q8NEA9 526 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 SEMA6AQ9H2E6 1030 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 PFDN4Q9NQP4 134 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 NXF1Q9UBU9 619 aaKnown RBP12.56□□□□□ -0.4
HERC6-203ENST00000380265 ITGA11Q9UKX5 1188 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 ZNF232Q9UNY5 417 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 ASTN2O75129 1339 aaPredicted RBP12.56□□□□□ -0.4
HERC6-203ENST00000380265 CNTNAP2Q9UHC6 1331 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 BBOX1O75936 387 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 NAA20P61599 178 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 PRAMEP78395 509 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 ORC1Q13415 861 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 SNAPC2Q13487 334 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 ZBTB46Q86UZ6 589 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 NLRP7Q8WX94 980 aa12.56□□□□□ -0.4
HERC6-203ENST00000380265 HAUS8Q9BT25 410 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms