RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 TSPYL2Q9H2G4 693 aaPredicted RBP15.45■□□□□ 0.06
PRNP-201ENST00000379440 KDM4CQ9H3R0 1056 aa15.45■□□□□ 0.06
PRNP-201ENST00000379440 TIMM13Q9Y5L4 95 aaPredicted RBP15.45■□□□□ 0.06
PRNP-201ENST00000379440 TRPV2Q9Y5S1 764 aa15.45■□□□□ 0.06
PRNP-201ENST00000379440 RASA4BC9J798 803 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 KCNN4O15554 427 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 RASA4O43374 803 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 PTPN1P18031 435 aaKnown RBP15.44■□□□□ 0.06
PRNP-201ENST00000379440 NDUFV1P49821 464 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 BBS9Q3SYG4 887 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 SLC9A4Q6AI14 798 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 C6orf89Q6UWU4 347 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 GDAP1Q8TB36 358 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 DYDC1Q8WWB3 177 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 FAM149B1Q96BN6 582 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 HSFY1Q96LI6 401 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 NDC80O14777 642 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 VIMP08670 466 aaKnown RBP15.44■□□□□ 0.06
PRNP-201ENST00000379440 DESP17661 470 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 CYP2F1P24903 491 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 PITX1P78337 314 aaPredicted RBP15.44■□□□□ 0.06
PRNP-201ENST00000379440 EFTUD2Q15029 972 aaKnown RBP eCLIP15.44■□□□□ 0.061e-10■■■■□ 25.2
PRNP-201ENST00000379440 PDCD2Q16342 344 aaPredicted RBP15.44■□□□□ 0.06
PRNP-201ENST00000379440 DEFB106AQ8N104 65 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 PYROXD2Q8N2H3 581 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 FBXO36Q8NEA4 188 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 HNRNPABQ99729 332 aaKnown RBP15.44■□□□□ 0.06
PRNP-201ENST00000379440 DUSP16Q9BY84 665 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 AGO3Q9H9G7 860 aaKnown RBP15.44■□□□□ 0.06
PRNP-201ENST00000379440 KIF9Q9HAQ2 790 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 MTMR10Q9NXD2 777 aa15.44■□□□□ 0.06
PRNP-201ENST00000379440 XPO1O14980 1071 aaKnown RBP15.43■□□□□ 0.06
PRNP-201ENST00000379440 ACADSBP45954 432 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 FLT3LGP49771 235 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 CLCNKBP51801 687 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 PKN2Q16513 984 aaKnown RBP15.43■□□□□ 0.06
PRNP-201ENST00000379440 MDH1BQ5I0G3 518 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 RNF187Q5TA31 235 aaPredicted RBP15.43■□□□□ 0.06
PRNP-201ENST00000379440 FAXCQ5TGI0 409 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 GKAP1Q5VSY0 366 aaPredicted RBP15.43■□□□□ 0.06
PRNP-201ENST00000379440 SENP8Q96LD8 212 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 ZNF670Q9BS34 389 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 CCDC134Q9H6E4 229 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 NRDE2Q9H7Z3 1164 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.43■□□□□ 0.06
PRNP-201ENST00000379440 AP4E1Q9UPM8 1137 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 TGM2P21980 687 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 RPS6KA3P51812 740 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 GBE1Q04446 702 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 SLC10A2Q12908 348 aaPredicted RBP15.43■□□□□ 0.06
PRNP-201ENST00000379440 C3orf62Q6ZUJ4 267 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 MICALCLQ6ZW33 695 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 FAM131BQ86XD5 332 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 SPATS2Q86XZ4 545 aaKnown RBP15.43■□□□□ 0.06
PRNP-201ENST00000379440 IGDCC3Q8IVU1 814 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 CACNA2D3Q8IZS8 1091 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 C3orf58Q8NDZ4 430 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 CABS1Q96KC9 395 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 KCTD15Q96SI1 283 aaPredicted RBP15.43■□□□□ 0.06
PRNP-201ENST00000379440 PAAF1Q9BRP4 392 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 MED10Q9BTT4 135 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 SENP6Q9GZR1 1112 aaPredicted RBP15.43■□□□□ 0.06
PRNP-201ENST00000379440 TMPRSS4Q9NRS4 437 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 RABGEF1Q9UJ41 708 aa15.43■□□□□ 0.06
PRNP-201ENST00000379440 ZMYND8Q9ULU4 1186 aaPredicted RBP15.43■□□□□ 0.06
PRNP-201ENST00000379440 SYNJ2BP-COX16A0A087WUM0 186 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 E7ESA3 106 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 GABRDO14764 452 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 KPNA6O60684 536 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 AVILO75366 819 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 SPAG7O75391 227 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 DPYSL2Q16555 572 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 PDIK1LQ8N165 341 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 FAF2Q96CS3 445 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 CRTAC1Q9NQ79 661 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 RAB6BQ9NRW1 208 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 DDX43Q9NXZ2 648 aaKnown RBP15.42■□□□□ 0.06
PRNP-201ENST00000379440 COX16Q9P0S2 106 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 MFHAS1Q9Y4C4 1052 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 AP1G2O75843 785 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 KIAA0754O94854 1291 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 ZBED1O96006 694 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 THP07101 528 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 NPR3P17342 541 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 MAP3K7CLP57077 242 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 DCAF6Q58WW2 860 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 MFSD14CQ5VZR4 134 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 CLEC20AQ6ZU45 233 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 TRABD2AQ86V40 505 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 CYLDQ9NQC7 956 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 CHMP2BQ9UQN3 213 aa15.42■□□□□ 0.06
PRNP-201ENST00000379440 ARL5CA6NH57 179 aa15.41■□□□□ 0.06
PRNP-201ENST00000379440 CASTOR2A6NHX0 329 aa15.41■□□□□ 0.06
PRNP-201ENST00000379440 SNUPNO95149 360 aaKnown RBP15.41■□□□□ 0.06
PRNP-201ENST00000379440 SCNN1AP37088 669 aa15.41■□□□□ 0.06
PRNP-201ENST00000379440 MATKP42679 507 aa15.41■□□□□ 0.06
PRNP-201ENST00000379440 SULT1E1P49888 294 aa15.41■□□□□ 0.06
PRNP-201ENST00000379440 SCNN1GP51170 649 aa15.41■□□□□ 0.06
PRNP-201ENST00000379440 CAP1Q01518 475 aa15.41■□□□□ 0.06
PRNP-201ENST00000379440 RNASELQ05823 741 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms