RNA–Protein interactions for RNA: ENST00000379215.8

ECHDC3-201, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHDC3, Length 1,649 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-201ENST00000379215 RAPGEF5Q92565 580 aa25.58■■□□□ 1.69
ECHDC3-201ENST00000379215 EDEM1Q92611 657 aa25.58■■□□□ 1.69
ECHDC3-201ENST00000379215 CDK5RAP1Q96SZ6 601 aaKnown RBP25.58■■□□□ 1.69
ECHDC3-201ENST00000379215 AP1M1Q9BXS5 423 aa25.58■■□□□ 1.69
ECHDC3-201ENST00000379215 TLR9Q9NR96 1032 aa25.58■■□□□ 1.69
ECHDC3-201ENST00000379215 OLA1Q9NTK5 396 aaKnown RBP25.58■■□□□ 1.69
ECHDC3-201ENST00000379215 KLHL11Q9NVR0 708 aa25.58■■□□□ 1.69
ECHDC3-201ENST00000379215 DDIT4Q9NX09 232 aa25.58■■□□□ 1.69
ECHDC3-201ENST00000379215 YIPF1Q9Y548 306 aa25.58■■□□□ 1.69
ECHDC3-201ENST00000379215 SOAT2O75908 522 aa25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 TUBBP07437 444 aa25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 TFE3P19532 575 aaPredicted RBP25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 CDKN2BP42772 138 aa25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 TAZQ16635 292 aa25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 ERCC6LQ2NKX8 1250 aa25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 ARL13BQ3SXY8 428 aa25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 OTUD1Q5VV17 481 aaPredicted RBP25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 SCD5Q86SK9 330 aa25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 NTAN1Q96AB6 310 aa25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 SNRNP25Q9BV90 132 aaKnown RBP25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 SMOC2Q9H3U7 446 aa25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 SLITRK6Q9H5Y7 841 aa25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP25.57■■□□□ 1.68
ECHDC3-201ENST00000379215 A0A1W2PQH9 124 aa25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 PI4K2BG5E9Z4 385 aa25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 C1RP00736 705 aa25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 CNPP09543 421 aaKnown RBP25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 CDH6P55285 790 aa25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 USP46P62068 366 aa25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 NME3Q13232 169 aa25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 C8orf74Q6P047 294 aa25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 DQX1Q8TE96 717 aaKnown RBP25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 TGS1Q96RS0 853 aaKnown RBP25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 GMIPQ9P107 970 aa25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 PLXNA3P51805 1871 aa25.56■■□□□ 1.68
ECHDC3-201ENST00000379215 hCG_1818297A0A087WSY0 165 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 C3orf70A6NLC5 250 aaPredicted RBP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 SEC24AO95486 1093 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 CHRNA3P32297 505 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 TAF10Q12962 218 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 KLF1Q13351 362 aaPredicted RBP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 DPYSL2Q16555 572 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 PDE12Q6L8Q7 609 aaKnown RBP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 MSANTD2Q6P1R3 559 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 TADA2BQ86TJ2 420 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 FAM131BQ86XD5 332 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 FAM71BQ8TC56 605 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 SPPL3Q8TCT6 385 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 POF1BQ8WVV4 589 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 RUBCNQ92622 972 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 SERPINB11Q96P15 392 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 ZNF670Q9BS34 389 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 C17orf80Q9BSJ5 609 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 ADAM33Q9BZ11 813 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 UBE2OQ9C0C9 1292 aaKnown RBP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 NOL12Q9UGY1 213 aaKnown RBP eCLIP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 AP4E1Q9UPM8 1137 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 V9GYY5 206 aaPredicted RBP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 PHF2O75151 1096 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 IGLV3-25P01717 112 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 ARSEP51690 589 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 EPHB3P54753 998 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 SCAPQ12770 1279 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 TAF12Q16514 161 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 CYP1B1Q16678 543 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 EFHC2Q5JST6 749 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 CCDC149Q6ZUS6 474 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 TAC4Q86UU9 113 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 ITIH5Q86UX2 942 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 C12orf50Q8NA57 414 aaPredicted RBP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 CCDC26Q8TAB7 109 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 GPR152Q8TDT2 470 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 GIPC2Q8TF65 315 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 ACSF2Q96CM8 615 aaPredicted RBP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 TRMT2BQ96GJ1 504 aaKnown RBP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 ALG13Q9NP73 1137 aaKnown RBP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 PIGVQ9NUD9 493 aa25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 RCOR3Q9P2K3 495 aaPredicted RBP25.55■■□□□ 1.68
ECHDC3-201ENST00000379215 TARSL2A2RTX5 802 aaKnown RBP25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 DYNC1I1O14576 645 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 CA3P07451 260 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 PPP3CCP48454 512 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 ZNF135P52742 658 aaPredicted RBP25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 TFDP2Q14188 446 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 RAB6CQ53S08 254 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 RTL10Q7L3V2 364 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 MRPL43Q8N983 215 aaKnown RBP25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 MYRFLQ96LU7 910 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 KLHL5Q96PQ7 755 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 KRT12Q99456 494 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 CALN1Q9BXU9 219 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 MAK16Q9BXY0 300 aaKnown RBP25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 FRMD8P1Q9BZ68 369 aaPredicted RBP25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 RAB6CQ9H0N0 254 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 PRDM16Q9HAZ2 1276 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 NMUR1Q9HB89 426 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 UXTQ9UBK9 157 aaPredicted RBP25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 FZD10Q9ULW2 581 aa25.54■■□□□ 1.68
ECHDC3-201ENST00000379215 ASB3Q9Y575 518 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms