RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ATF2P15336 505 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 MATKP42679 507 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 MMP13P45452 471 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 ATXN1P54253 815 aaKnown RBP20.22■□□□□ 0.83
SSU72-204ENST00000378726 CACNA2D1P54289 1103 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 OTUD4Q01804 1114 aaKnown RBP20.22■□□□□ 0.83
SSU72-204ENST00000378726 DPYSL3Q14195 570 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 KRT81Q14533 505 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 OASLQ15646 514 aaKnown RBP20.22■□□□□ 0.83
SSU72-204ENST00000378726 OVOS1Q6IE37 1185 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 FAM171BQ6P995 826 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 CYB5D1Q6P9G0 228 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 THEM5Q8N1Q8 247 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 ZMIZ2Q8NF64 920 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 SLC35B2Q8TB61 432 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 TEKT4Q8WW24 435 aa20.22■□□□□ 0.83
SSU72-204ENST00000378726 NKD2Q969F2 451 aaPredicted RBP20.22■□□□□ 0.83
SSU72-204ENST00000378726 TDRD15B5MCY1 1934 aaKnown RBP20.21■□□□□ 0.83
SSU72-204ENST00000378726 TP73O15350 636 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 KLRC2P26717 231 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 RNASELQ05823 741 aaKnown RBP20.21■□□□□ 0.83
SSU72-204ENST00000378726 DSC1Q08554 894 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 PDK2Q15119 407 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 PLEKHG4Q58EX7 1191 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 INTS6LQ5JSJ4 861 aaKnown RBP20.21■□□□□ 0.83
SSU72-204ENST00000378726 ALLCQ8N6M5 410 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 MYLPFQ96A32 169 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 SNRNP25Q9BV90 132 aaKnown RBP20.21■□□□□ 0.83
SSU72-204ENST00000378726 TMEM30AQ9NV96 361 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 TMEM161AQ9NX61 479 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 OGDHLQ9ULD0 1010 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 ARHGEF37A1IGU5 675 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 RGS16O15492 202 aaPredicted RBP20.21■□□□□ 0.83
SSU72-204ENST00000378726 PQBP1O60828 265 aaKnown RBP20.21■□□□□ 0.83
SSU72-204ENST00000378726 ITGAVP06756 1048 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 CCL5P13501 91 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 DCAF6Q58WW2 860 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 COLGALT2Q8IYK4 626 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 SMARCD1Q96GM5 515 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 TMEM121Q9BTD3 319 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 FRMD8P1Q9BZ68 369 aaPredicted RBP20.21■□□□□ 0.83
SSU72-204ENST00000378726 KDM4CQ9H3R0 1056 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 TBC1D13Q9NVG8 400 aa20.21■□□□□ 0.83
SSU72-204ENST00000378726 FRMPD3Q5JV73 1810 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 IL4RP24394 825 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 OR1G1P47890 313 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 ITGA8P53708 1063 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 CA9Q16790 459 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 SLC25A52Q3SY17 297 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 STRADAQ7RTN6 431 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 PARP9Q8IXQ6 854 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 GLIS1Q8NBF1 620 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 OR10T2Q8NGX3 314 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 FAM193BQ96PV7 902 aaPredicted RBP20.2■□□□□ 0.82
SSU72-204ENST00000378726 RNF157Q96PX1 679 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 RHOBTB2Q9BYZ6 727 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 ULBP1Q9BZM6 244 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 ANAPC5Q9UJX4 755 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 PCDHB7Q9Y5E2 793 aa20.2■□□□□ 0.82
SSU72-204ENST00000378726 APOC4-APOC2K7ER74 178 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 MDM4O15151 490 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 APOC2P02655 101 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 ZSCAN5DPP0CG00 497 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 COL6A1P12109 1028 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 LRRTM3Q86VH5 581 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 CCDC197Q8NCU1 140 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 EPS8L3Q8TE67 593 aaKnown RBP20.19■□□□□ 0.82
SSU72-204ENST00000378726 TMEM209Q96SK2 561 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 PCDH18Q9HCL0 1135 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 TMLHEQ9NVH6 421 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 PITPNM1O00562 1244 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 NRP1O14786 923 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 FBXO21O94952 628 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 ETS1P14921 441 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 TYMPP19971 482 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 BDNFP23560 247 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 NOS2P35228 1153 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 SLCO1A2P46721 670 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 ATN1P54259 1190 aaPredicted RBP20.19■□□□□ 0.82
SSU72-204ENST00000378726 TFDP2Q14188 446 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 RAB41Q5JT25 222 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 RHBDF2Q6PJF5 856 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 GPRIN1Q7Z2K8 1008 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 LRRC34Q8IZ02 419 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 CCHCR1Q8TD31 782 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 CSNK1G1Q9HCP0 422 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 DNAJB4Q9UDY4 337 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 PCDHB8Q9UN66 801 aa20.19■□□□□ 0.82
SSU72-204ENST00000378726 CCT8L1PA6NM43 557 aa20.18■□□□□ 0.82
SSU72-204ENST00000378726 SGK1O00141 431 aa20.18■□□□□ 0.82
SSU72-204ENST00000378726 DAB1O75553 588 aa20.18■□□□□ 0.82
SSU72-204ENST00000378726 PECAM1P16284 738 aaPredicted RBP20.18■□□□□ 0.82
SSU72-204ENST00000378726 SULT1E1P49888 294 aa20.18■□□□□ 0.82
SSU72-204ENST00000378726 CAV1Q03135 178 aa20.18■□□□□ 0.82
SSU72-204ENST00000378726 YWHAHQ04917 246 aaPredicted RBP20.18■□□□□ 0.82
SSU72-204ENST00000378726 SLMAPQ14BN4 828 aa20.18■□□□□ 0.82
SSU72-204ENST00000378726 HFE2Q6ZVN8 426 aa20.18■□□□□ 0.82
SSU72-204ENST00000378726 BBOF1Q8ND07 529 aa20.18■□□□□ 0.82
SSU72-204ENST00000378726 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.18■□□□□ 0.82
SSU72-204ENST00000378726 SEPT8Q92599 483 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms