RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 SERPINB3P29508 390 aa20.25■□□□□ 0.83
SHROOM1-202ENST00000378676 ANKRD20A2Q5SQ80 823 aa20.25■□□□□ 0.83
SHROOM1-202ENST00000378676 ANKRD20A1Q5TYW2 823 aa20.25■□□□□ 0.83
SHROOM1-202ENST00000378676 ANKRD20A3Q5VUR7 823 aa20.25■□□□□ 0.83
SHROOM1-202ENST00000378676 ZMAT2Q96NC0 199 aaKnown RBP20.25■□□□□ 0.83
SHROOM1-202ENST00000378676 MECRQ9BV79 373 aa20.25■□□□□ 0.83
SHROOM1-202ENST00000378676 KLC2Q9H0B6 622 aa20.25■□□□□ 0.83
SHROOM1-202ENST00000378676 MROH8Q9H579 483 aa20.25■□□□□ 0.83
SHROOM1-202ENST00000378676 SLC5A4Q9NY91 659 aa20.25■□□□□ 0.83
SHROOM1-202ENST00000378676 SLC15A5A6NIM6 579 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 COPEO14579 308 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 DLDP09622 509 aaKnown RBP20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 NEFHP12036 1026 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 PRKCHP24723 683 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 CYP2F1P24903 491 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 MAGEA6P43360 314 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 RASSF2P50749 326 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 GBE1Q04446 702 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 MPP5Q8N3R9 675 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 PTCD3Q96EY7 689 aaKnown RBP20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 ZNF670Q9BS34 389 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 NRDE2Q9H7Z3 1164 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 TUBGCP4Q9UGJ1 667 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 CCDC189A1A4V9 331 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 MDM4O15151 490 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 GNAZP19086 355 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 MRPS5P82675 430 aaKnown RBP20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 CDK16Q00536 496 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 SLC10A2Q12908 348 aaPredicted RBP20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 KYAT1Q16773 422 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 CES4AQ5XG92 561 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 RFWD3Q6PCD5 774 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 UNC5AQ6ZN44 842 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 TMEM110Q86TL2 294 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 ANKRD13AQ8IZ07 590 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 SLC35F5Q8WV83 523 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 DPEP3Q9H4B8 488 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 DENND2DQ9H6A0 471 aaPredicted RBP20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 RNF19AQ9NV58 838 aa20.24■□□□□ 0.83
SHROOM1-202ENST00000378676 ASB14A6NK59 587 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 NPTXRO95502 500 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 GRM5P41594 1212 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 LAMC2Q13753 1193 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 STILQ15468 1287 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 TRMT10BQ6PF06 316 aaKnown RBP20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 TTC7BQ86TV6 843 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 TBCBQ99426 244 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 C16orf70Q9BSU1 422 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 ADARB2Q9NS39 739 aaKnown RBP20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 RFPL1O75677 317 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 SNRPAP09012 282 aaKnown RBP20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 PPIL2Q13356 520 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 SESTD1Q86VW0 696 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 TTC39CQ8N584 583 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 OPTNQ96CV9 577 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 CADM1Q9BY67 442 aaKnown RBP20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 FRMD8Q9BZ67 464 aaPredicted RBP20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 ZNF180Q9UJW8 692 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 MFHAS1Q9Y4C4 1052 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 NR2E3Q9Y5X4 410 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 COL1A2P08123 1366 aa20.23■□□□□ 0.83
SHROOM1-202ENST00000378676 ENTPD5O75356 428 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 TGDSO95455 350 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 APOEP02649 317 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 CALB2P22676 271 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 L1CAMP32004 1257 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 CCNFP41002 786 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 MAGEA3P43357 314 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 CCNG1P51959 295 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 CDKL3Q8IVW4 592 aaPredicted RBP20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 STK32AQ8WU08 396 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 C18orf25Q96B23 403 aaPredicted RBP20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 SNTG2Q9NY99 539 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 GJD2Q9UKL4 321 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 FAM237BA0A1B0GVD1 139 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 TPBGLP0DKB5 382 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 YBX3P16989 372 aaKnown RBP eCLIP20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 ADCYAP1R1P41586 468 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 GRIA1P42261 906 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 TTLL12Q14166 644 aaPredicted RBP20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 CRYMQ14894 314 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 MARCH8Q5T0T0 291 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 NT5DC4Q86YG4 428 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 PPTC7Q8NI37 304 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 SIGLEC10Q96LC7 697 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 NUDCD1Q96RS6 583 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 IQCGQ9H095 443 aaKnown RBP20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 DHX35Q9H5Z1 703 aaKnown RBP20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 FAM124BQ9H5Z6 455 aaPredicted RBP20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 RNF181Q9P0P0 153 aa20.22■□□□□ 0.83
SHROOM1-202ENST00000378676 CCDC195A0A1B0GUA6 201 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 H0Y3Z8 333 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 DNAJC6O75061 913 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 KRT37O76014 449 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 IL1BP01584 269 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 SETSIPP0DME0 302 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 CYP2C8P10632 490 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 MYL2P10916 166 aa20.21■□□□□ 0.83
SHROOM1-202ENST00000378676 NAA25Q14CX7 972 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms