RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 TMEM35BQ8NCS4 154 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 AP4B1Q9Y6B7 739 aa16.43■□□□□ 0.22
CKAP4-201ENST00000378026 SF3B1O75533 1304 aaKnown RBP eCLIP16.43■□□□□ 0.22
CKAP4-201ENST00000378026 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.42■□□□□ 0.22
CKAP4-201ENST00000378026 SUPT3HO75486 399 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 KRT38O76015 456 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 KLHL2O95198 593 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 CRTAMO95727 393 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 SETSIPP0DME0 302 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 CD19P15391 556 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 PDK1Q15118 436 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 HADHQ16836 314 aaKnown RBP16.42■□□□□ 0.22
CKAP4-201ENST00000378026 TSHZ1Q6ZSZ6 1077 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 C4orf19Q8IY42 314 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 TFB1MQ8WVM0 346 aaKnown RBP16.42■□□□□ 0.22
CKAP4-201ENST00000378026 ZDHHC15Q96MV8 337 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.42■□□□□ 0.22
CKAP4-201ENST00000378026 TELO2Q9Y4R8 837 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 HEY1Q9Y5J3 304 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 E9PBE3 544 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 KCNN4O15554 427 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 KLHL41O60662 606 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 ITGBL1O95965 494 aaPredicted RBP16.42■□□□□ 0.22
CKAP4-201ENST00000378026 PGM2L1Q6PCE3 622 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 ATG14Q6ZNE5 492 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 AMIGO2Q86SJ2 522 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 RTKN2Q8IZC4 609 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 FBXW8Q8N3Y1 598 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 COPS7BQ9H9Q2 264 aaPredicted RBP16.42■□□□□ 0.22
CKAP4-201ENST00000378026 GABBR1Q9UBS5 961 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 WDR64B1ANS9 1081 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 PIK3R2O00459 728 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 AIM2O14862 343 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 PSMD6Q15008 389 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 MAVSQ7Z434 540 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 ACTRT2Q8TDY3 377 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 CHURC1Q8WUH1 139 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 TFAP2BQ92481 460 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 JADE3Q92613 823 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 LRGUKQ96M69 825 aa16.42■□□□□ 0.22
CKAP4-201ENST00000378026 ZNF219Q9P2Y4 722 aaPredicted RBP16.42■□□□□ 0.22
CKAP4-201ENST00000378026 HMX2A2RU54 273 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 CFLARO15519 480 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 PEX1O43933 1283 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 KRT7P08729 469 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 FAM163BP0C2L3 166 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 CCDC166P0CW27 439 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 OSBPP22059 807 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 SLC5A2P31639 672 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 PTPN7P35236 360 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 MYBPC1Q00872 1141 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 PQLC1Q8N2U9 271 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 MPP5Q8N3R9 675 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 GAB3Q8WWW8 586 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 GLIS2Q9BZE0 524 aaPredicted RBP16.41■□□□□ 0.22
CKAP4-201ENST00000378026 HAPLN2Q9GZV7 340 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 TBC1D22BQ9NU19 505 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 CNTNAP2Q9UHC6 1331 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 TCRBV5S1A1TA0A578 114 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 DKC1O60832 514 aaKnown RBP eCLIP16.41■□□□□ 0.22
CKAP4-201ENST00000378026 C1QAP02745 245 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 GARTP22102 1010 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 IDH3AP50213 366 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 PPIDQ08752 370 aaKnown RBP16.41■□□□□ 0.22
CKAP4-201ENST00000378026 KRT81Q14533 505 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 KCNJ11Q14654 390 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 RAB6CQ53S08 254 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 SH3D19Q5HYK7 790 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 TEDDM1Q5T9Z0 273 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 N4BP2L1Q5TBK1 243 aaPredicted RBP16.41■□□□□ 0.22
CKAP4-201ENST00000378026 LRRC8BQ6P9F7 803 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 DEPDC1BQ8WUY9 529 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 TAAR1Q96RJ0 339 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 RAB6CQ9H0N0 254 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 PIH1D1Q9NWS0 290 aaKnown RBP16.41■□□□□ 0.22
CKAP4-201ENST00000378026 ARHGEF38Q9NXL2 777 aa16.41■□□□□ 0.22
CKAP4-201ENST00000378026 TCP10L2B9ZVM9 353 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 APOC4-APOC2K7ER74 178 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 DGKIO75912 1065 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 APOC2P02655 101 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 HDAC4P56524 1084 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 PSMC1P62191 440 aaKnown RBP16.4■□□□□ 0.22
CKAP4-201ENST00000378026 XIAPP98170 497 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 HSP90AA5PQ58FG0 334 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 UNC5AQ6ZN44 842 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 KBTBD6Q86V97 674 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 ZNF513Q8N8E2 541 aaPredicted RBP16.4■□□□□ 0.22
CKAP4-201ENST00000378026 CERKQ8TCT0 537 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 BTBD9Q96Q07 612 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 IMPG2Q9BZV3 1241 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 SENP6Q9GZR1 1112 aaPredicted RBP16.4■□□□□ 0.22
CKAP4-201ENST00000378026 PLAC1Q9HBJ0 212 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 POPDC2Q9HBU9 364 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 ACSS2Q9NR19 701 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 BTBD7Q9P203 1132 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 SEPT9Q9UHD8 586 aaPredicted RBP16.4■□□□□ 0.22
CKAP4-201ENST00000378026 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 COQ9O75208 318 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
CKAP4-201ENST00000378026 PIM1P11309 404 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms