RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 DDX23Q9BUQ8 820 aaKnown RBP15.01□□□□□ -0.01
TCOF1-202ENST00000377797 TRPM5Q9NZQ8 1165 aa15.01□□□□□ -0.01
TCOF1-202ENST00000377797 CLDN5O00501 218 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 CHRNB2P17787 502 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 NAA25Q14CX7 972 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 IFNL1Q8IU54 200 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 EIF1ADQ8N9N8 165 aaKnown RBP15□□□□□ -0.01
TCOF1-202ENST00000377797 NPLOC4Q8TAT6 608 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 SNRNP25Q9BV90 132 aaKnown RBP15□□□□□ -0.01
TCOF1-202ENST00000377797 LRRC19Q9H756 370 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 WDR3Q9UNX4 943 aaKnown RBP eCLIP15□□□□□ -0.01
TCOF1-202ENST00000377797 A0A1B0GUA9 196 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 E5RI56 91 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 PMM2O15305 246 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 SEPT4O43236 478 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 DIAPH2O60879 1101 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 NSUN2Q08J23 767 aaKnown RBP eCLIP15□□□□□ -0.01
TCOF1-202ENST00000377797 SNCBQ16143 134 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 MAP3K21Q5TCX8 1036 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 TMEM192Q8IY95 271 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 LBHD1Q9BQE6 289 aaPredicted RBP15□□□□□ -0.01
TCOF1-202ENST00000377797 TMEM39AQ9NV64 488 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 CDH9Q9ULB4 789 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 PADI3Q9ULW8 664 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 E2F8A0AVK6 867 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 F5H5T6 163 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 RBL1P28749 1068 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 RPL9P32969 192 aaKnown RBP15□□□□□ -0.01
TCOF1-202ENST00000377797 LINC00523Q86TU6 105 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 PLEKHO2Q8TD55 490 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 CYP4F11Q9HBI6 524 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 HAUS5O94927 633 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 VNN1O95497 513 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 ENPEPQ07075 957 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 ZNF844Q08AG5 666 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 TTC39BQ5VTQ0 682 aaPredicted RBP15□□□□□ -0.01
TCOF1-202ENST00000377797 LCLAT1Q6UWP7 414 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 AGR3Q8TD06 166 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 NAT9Q9BTE0 207 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 CHST12Q9NRB3 414 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 UBP1Q9NZI7 540 aa15□□□□□ -0.01
TCOF1-202ENST00000377797 FKTNO75072 461 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 ATG7O95352 703 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 CKMP06732 381 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 BRCC3P46736 316 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 RAD23BP54727 409 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 TWF1Q12792 350 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 SLC12A1Q13621 1099 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 NOMO2Q5JPE7 1267 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 HTR3CQ8WXA8 447 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 TFAP2BQ92481 460 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 MRPL9Q9BYD2 267 aaKnown RBP14.99□□□□□ -0.01
TCOF1-202ENST00000377797 B3GNT5Q9BYG0 378 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 DDX60Q8IY21 1712 aaKnown RBP14.99□□□□□ -0.01
TCOF1-202ENST00000377797 NCAM2O15394 837 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 FAM107AO95990 144 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 LRG1P02750 347 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 CCL23P55773 120 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 PAPPAQ13219 1627 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 POLNQ7Z5Q5 900 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 N4BP2Q86UW6 1770 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-202ENST00000377797 ARHGEF38Q9NXL2 777 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 ARL2BPQ9Y2Y0 163 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 NEMP1O14524 444 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 CLGNO14967 610 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 TRUB2O95900 331 aaKnown RBP14.99□□□□□ -0.01
TCOF1-202ENST00000377797 ETS1P14921 441 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 ELK3P41970 407 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 TRADDQ15628 312 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 ZNF792Q3KQV3 632 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 MON1BQ7L1V2 547 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 PAFAH2Q99487 392 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-202ENST00000377797 DDX3YO15523 660 aaKnown RBP14.99□□□□□ -0.01
TCOF1-202ENST00000377797 YWHAQP27348 245 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 SSTR1P30872 391 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 MMRN1Q13201 1228 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 ZNF177Q13360 481 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-202ENST00000377797 BIRC2Q13490 618 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 BTG3Q14201 252 aaPredicted RBP14.99□□□□□ -0.01
TCOF1-202ENST00000377797 CD99L2Q8TCZ2 262 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 TSSK1BQ9BXA7 367 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 TKTL2Q9H0I9 626 aa14.99□□□□□ -0.01
TCOF1-202ENST00000377797 TLR8Q9NR97 1041 aaKnown RBP14.99□□□□□ -0.01
TCOF1-202ENST00000377797 XIRP1Q702N8 1843 aaKnown RBP14.98□□□□□ -0.01
TCOF1-202ENST00000377797 SLX4Q8IY92 1834 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 TXNDC9O14530 226 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 LIASO43766 372 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 ERBB2P04626 1255 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 ATP4AP20648 1035 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 NR2C2P49116 596 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 PRKCZQ05513 592 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 LMNTD2Q8IXW0 634 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 FAM96AQ9H5X1 160 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 EPB41L3Q9Y2J2 1087 aaPredicted RBP14.98□□□□□ -0.01
TCOF1-202ENST00000377797 USP15Q9Y4E8 981 aaPredicted RBP14.98□□□□□ -0.01
TCOF1-202ENST00000377797 MRPL42Q9Y6G3 142 aaKnown RBP14.98□□□□□ -0.01
TCOF1-202ENST00000377797 CHEK2O96017 543 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 GEMP55040 296 aa14.98□□□□□ -0.01
TCOF1-202ENST00000377797 TBX4P57082 545 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms