RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 TRIM62Q9BVG3 475 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 ADAM7Q9H2U9 754 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.26■■□□□ 1.15
CBWD3-202ENST00000377342 CALCOCO1Q9P1Z2 691 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 CAPN6Q9Y6Q1 641 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 KRT86O43790 486 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 TLR5O60602 858 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 GPD1P21695 349 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 NOS2P35228 1153 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 TUBP50607 506 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 CCDC14Q49A88 953 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 ARHGAP29Q52LW3 1261 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 MSANTD2Q6P1R3 559 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 POTEHQ6S545 545 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 BNIPLQ7Z465 357 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 CPNE8Q86YQ8 564 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 DQX1Q8TE96 717 aaKnown RBP22.26■■□□□ 1.15
CBWD3-202ENST00000377342 NPY6RQ99463 290 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 GUCA1BQ9UMX6 200 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 PAXBP1Q9Y5B6 917 aa22.26■■□□□ 1.15
CBWD3-202ENST00000377342 MDM4O15151 490 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 CCP110O43303 1012 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 MOCS3O95396 460 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 TBX18O95935 607 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 PDGFRAP16234 1089 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 CEBPBP17676 345 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 PTPN9P43378 593 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 ZNF143P52747 638 aaPredicted RBP22.25■■□□□ 1.15
CBWD3-202ENST00000377342 ITIH3Q06033 890 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 C15orf59Q2T9L4 293 aaPredicted RBP22.25■■□□□ 1.15
CBWD3-202ENST00000377342 RAB6CQ53S08 254 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 TAC4Q86UU9 113 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 ZNF276Q8N554 614 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 SMRP1Q8NCR6 262 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 TPCN2Q8NHX9 752 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 GCNAQ96QF7 691 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 SLC22A12Q96S37 553 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 TBCBQ99426 244 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 RAB6CQ9H0N0 254 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 ATXN3LQ9H3M9 355 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 SMOC2Q9H3U7 446 aa22.25■■□□□ 1.15
CBWD3-202ENST00000377342 CAPN9O14815 690 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 COCHO43405 550 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 BUB1BO60566 1050 aaPredicted RBP22.24■■□□□ 1.15
CBWD3-202ENST00000377342 FGF19O95750 216 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 OLFM2O95897 454 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 IGLV3-25P01717 112 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 RALAP11233 206 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 NOP2P46087 812 aaKnown RBP22.24■■□□□ 1.15
CBWD3-202ENST00000377342 TEAD2Q15562 447 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 CLUL1Q15846 466 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 SH3PXD2AQ5TCZ1 1133 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 TXNDC8Q6A555 127 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 ITFG1Q8TB96 612 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 MRPS31Q92665 395 aaKnown RBP22.24■■□□□ 1.15
CBWD3-202ENST00000377342 GOLPH3Q9H4A6 298 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 CLUHO75153 1309 aa22.24■■□□□ 1.15
CBWD3-202ENST00000377342 GRID2IPA4D2P6 1211 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 SDC4P31431 198 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 SLC25A52Q3SY17 297 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 HECTD3Q5T447 861 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 DAB2IPQ5VWQ8 1189 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 NIPA2Q8N8Q9 360 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 ADAM32Q8TC27 787 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 CNPY3Q9BT09 278 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 IRX2Q9BZI1 471 aaPredicted RBP22.23■■□□□ 1.15
CBWD3-202ENST00000377342 UBE2ZQ9H832 354 aaPredicted RBP22.23■■□□□ 1.15
CBWD3-202ENST00000377342 WDR6Q9NNW5 1121 aaKnown RBP22.23■■□□□ 1.15
CBWD3-202ENST00000377342 STAP1Q9ULZ2 295 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.23■■□□□ 1.15
CBWD3-202ENST00000377342 PSMA2P25787 234 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 SULT1E1P49888 294 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 ATP11AP98196 1134 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 EIF4EBP2Q13542 120 aaPredicted RBP22.23■■□□□ 1.15
CBWD3-202ENST00000377342 C10orf120Q5SQS8 335 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 RSRC2Q7L4I2 434 aaKnown RBP22.23■■□□□ 1.15
CBWD3-202ENST00000377342 ARFGAP1Q8N6T3 406 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 LRRC57Q8N9N7 239 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 RNF139Q8WU17 664 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 ING5Q8WYH8 240 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 RNF38Q9H0F5 515 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 TRPC7Q9HCX4 862 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 SFMBT1Q9UHJ3 866 aa22.23■■□□□ 1.15
CBWD3-202ENST00000377342 MRPS23Q9Y3D9 190 aaKnown RBP22.23■■□□□ 1.15
CBWD3-202ENST00000377342 H3BQ06 376 aaPredicted RBP22.22■■□□□ 1.15
CBWD3-202ENST00000377342 MYO1FO00160 1098 aa22.22■■□□□ 1.15
CBWD3-202ENST00000377342 MSI1O43347 362 aaKnown RBP22.22■■□□□ 1.15
CBWD3-202ENST00000377342 PROSCO94903 275 aa22.22■■□□□ 1.15
CBWD3-202ENST00000377342 TRUB2O95900 331 aaKnown RBP22.22■■□□□ 1.15
CBWD3-202ENST00000377342 EFEMP1Q12805 493 aa22.22■■□□□ 1.15
CBWD3-202ENST00000377342 MESDQ14696 234 aa22.22■■□□□ 1.15
CBWD3-202ENST00000377342 CDO1Q16878 200 aa22.22■■□□□ 1.15
CBWD3-202ENST00000377342 KLHDC10Q6PID8 442 aa22.22■■□□□ 1.15
CBWD3-202ENST00000377342 PPM1EQ8WY54 764 aa22.22■■□□□ 1.15
CBWD3-202ENST00000377342 CENPIQ92674 756 aaPredicted RBP22.22■■□□□ 1.15
CBWD3-202ENST00000377342 OLA1Q9NTK5 396 aaKnown RBP22.22■■□□□ 1.15
CBWD3-202ENST00000377342 IP6K2Q9UHH9 426 aa22.22■■□□□ 1.15
CBWD3-202ENST00000377342 CD207Q9UJ71 328 aa22.22■■□□□ 1.15
CBWD3-202ENST00000377342 TMEM110-MUSTN1A8MSY1 372 aa22.21■■□□□ 1.15
CBWD3-202ENST00000377342 ZNF197O14709 1029 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms