RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 SNNO75324 88 aaPredicted RBP9.98□□□□□ -0.81
TRIM39-202ENST00000376659 KRT19P08727 400 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 KCNE1P15382 129 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 RBL1P28749 1068 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 SF3A3Q12874 501 aaKnown RBP eCLIP9.98□□□□□ -0.81
TRIM39-202ENST00000376659 IRF5Q13568 498 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 SPARCL1Q14515 664 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 ACCSLQ4AC99 568 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 UNC93AQ86WB7 457 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 RFX6Q8HWS3 928 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 ZDHHC17Q8IUH5 632 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 OR6Y1Q8NGX8 325 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 AGAP11Q8TF27 550 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 BRI3BPQ8WY22 251 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 PTPN18Q99952 460 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 TRIM56Q9BRZ2 755 aaKnown RBP9.98□□□□□ -0.81
TRIM39-202ENST00000376659 NRDE2Q9H7Z3 1164 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 KCNK9Q9NPC2 374 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 ANLNQ9NQW6 1124 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 CASP8AP2Q9UKL3 1982 aa9.98□□□□□ -0.81
TRIM39-202ENST00000376659 A6NJR5 290 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 BTBD19C9JJ37 291 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 PIK3R2O00459 728 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 PPP1R12AO14974 1030 aaPredicted RBP9.97□□□□□ -0.81
TRIM39-202ENST00000376659 UGT1A9O60656 530 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 TGDSO95455 350 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 CSH1P0DML2 217 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 CSH2P0DML3 217 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 EIF4EBP2Q13542 120 aaPredicted RBP9.97□□□□□ -0.81
TRIM39-202ENST00000376659 STILQ15468 1287 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 MORN1Q5T089 497 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 TTC39CQ8N584 583 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 FAM172AQ8WUF8 416 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 ARNTL2Q8WYA1 636 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 INPP5DQ92835 1189 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 PPP1R16BQ96T49 567 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 MPHOSPH6Q99547 160 aaKnown RBP9.97□□□□□ -0.81
TRIM39-202ENST00000376659 UGT1A7Q9HAW7 530 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 UGT1A10Q9HAW8 530 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 UGT1A8Q9HAW9 530 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 GPATCH2LQ9NWQ4 482 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 FLRT1Q9NZU1 646 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 SIRPGQ9P1W8 387 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 EMCNQ9ULC0 261 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 CHMP2BQ9UQN3 213 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 VWA8A3KMH1 1905 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 CAPN14A8MX76 684 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 POC1B-GALNT4F8VUJ3 575 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 H0YHG0 523 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 H3BRB1 525 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 FYNP06241 537 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 CD19P15391 556 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 MAGEA12P43365 314 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 SARNPP82979 210 aaKnown RBP9.97□□□□□ -0.81
TRIM39-202ENST00000376659 FAAP100Q0VG06 881 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 TUBB3Q13509 450 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 SMG8Q8ND04 991 aaKnown RBP9.97□□□□□ -0.81
TRIM39-202ENST00000376659 ISL2Q96A47 359 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 ACAP3Q96P50 834 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 SLC2A13Q96QE2 648 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 C20orf27Q9GZN8 174 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 NXF3Q9H4D5 531 aaKnown RBP9.97□□□□□ -0.81
TRIM39-202ENST00000376659 TUT1Q9H6E5 874 aaKnown RBP9.97□□□□□ -0.81
TRIM39-202ENST00000376659 FZD10Q9ULW2 581 aa9.97□□□□□ -0.81
TRIM39-202ENST00000376659 PDGFRAP16234 1089 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 LMO2P25791 158 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 CDH6P55285 790 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 GBE1Q04446 702 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 SNAPC2Q13487 334 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 DPYSQ14117 519 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 SLC45A4Q5BKX6 768 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 SLC27A1Q6PCB7 646 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 UNC5AQ6ZN44 842 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 TIFABQ6ZNK6 161 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 FAM47EQ6ZV65 393 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 ANKRD23Q86SG2 305 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 SESTD1Q86VW0 696 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 OSTM1Q86WC4 334 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 ENDOVQ8N8Q3 282 aaKnown RBP9.96□□□□□ -0.81
TRIM39-202ENST00000376659 HEXIM2Q96MH2 286 aaKnown RBP9.96□□□□□ -0.81
TRIM39-202ENST00000376659 ZNF778Q96MU6 729 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 CCDC77Q9BR77 488 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 PITPNM3Q9BZ71 974 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 VPS37BQ9H9H4 285 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 PRDM16Q9HAZ2 1276 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 TMEM30AQ9NV96 361 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 SNTG2Q9NY99 539 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 DTLQ9NZJ0 730 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 USH1CQ9Y6N9 552 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 ANKRD36A6QL64 1941 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 MCF2LO15068 1137 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 ECM2O94769 699 aaPredicted RBP9.96□□□□□ -0.81
TRIM39-202ENST00000376659 IGBP1P78318 339 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 GPR142Q7Z601 462 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 CLNKQ7Z7G1 428 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 KIF2BQ8N4N8 673 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 GPRC5AQ8NFJ5 357 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 PYROXD1Q8WU10 500 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 CSPG4P5Q96PW8 444 aa9.96□□□□□ -0.81
TRIM39-202ENST00000376659 SMC6Q96SB8 1091 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms