RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 LGALS13Q9UHV8 139 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TSR3Q9UJK0 312 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SLC39A10Q9ULF5 831 aa14.89□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SIGLEC16A6NMB1 481 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CLGNO14967 610 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 HCRTO43612 131 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GM2AP17900 193 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 OLIG2Q13516 323 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PDCD2Q16342 344 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PAN2Q504Q3 1202 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RIPOR1Q6ZS17 1223 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DPP9Q86TI2 863 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 STRA6Q9BX79 667 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CCDC134Q9H6E4 229 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TIMM13Q9Y5L4 95 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DDX60LQ5H9U9 1706 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 MOCS2O96007 188 aaPredicted RBP14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 FGFR1P11362 822 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CASP2P42575 452 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CA9Q16790 459 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 FAM47CQ5HY64 1035 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ZNF358Q9NW07 568 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TM9SF1O15321 606 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GPC4O75487 556 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RGS20O76081 388 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 EDN1P05305 212 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CCDC130P13994 396 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 EIF4BP23588 611 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GARSP41250 739 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SULT1E1P49888 294 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 NUDT2P50583 147 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ZNF252P-AS1Q0IIN9 211 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 LPCAT4Q643R3 524 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 KIAA0319LQ8IZA0 1049 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 MPP5Q8N3R9 675 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RDM1Q8NG50 284 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CEP70Q8NHQ1 597 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 C7orf43Q8WVR3 580 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SNRNP25Q9BV90 132 aaKnown RBP14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PDGFCQ9NRA1 345 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DPP3Q9NY33 737 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 WDR35Q9P2L0 1181 aa14.88□□□□□ -0.03
TNFRSF1B-201ENST00000376259 INSRRP14616 1297 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 HABP4Q5JVS0 413 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 AGBL3Q8NEM8 1001 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 LRGUKQ96M69 825 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ATXN3LQ9H3M9 355 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PIDD1Q9HB75 910 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PNPOQ9NVS9 261 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ACTL7BQ9Y614 415 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PRRC2BQ5JSZ5 2229 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PGM3O95394 542 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ABHD2P08910 425 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RXRBP28702 533 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PKNOX1P55347 436 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PYROXD2Q8N2H3 581 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 STKLD1Q8NE28 680 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 INPP5DQ92835 1189 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ELOVL4Q9GZR5 314 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CDT1Q9H211 546 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 LSM8O95777 96 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 MED21Q13503 144 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RALGPS1Q5JS13 557 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 FBXO27Q8NI29 283 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SLC7A6OSQ96CW6 309 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 FBXL18Q96ME1 805 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 C2orf40Q9H1Z8 148 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ST6GALNAC4Q9H4F1 302 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TASP1Q9H6P5 420 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 AP4E1Q9UPM8 1137 aa14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 DRG1Q9Y295 367 aaKnown RBP14.87□□□□□ -0.03
TNFRSF1B-201ENST00000376259 PEX1O43933 1283 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TRUB2O95900 331 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 HSP90AA5PQ58FG0 334 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 EFHC2Q5JST6 749 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CDKL3Q8IVW4 592 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 AZIN2Q96A70 460 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 FAM167AQ96KS9 214 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GCNAQ96QF7 691 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ACO2Q99798 780 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 NTPCRQ9BSD7 190 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CAB39LQ9H9S4 337 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 BTBD7Q9P203 1132 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TPST1O60507 370 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GSTA2P09210 222 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 RBP5P82980 135 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 GALNTL6Q49A17 601 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 WASHC2DQ5SRD0 308 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 TREML2Q5T2D2 321 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ANO7Q6IWH7 933 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ST13P4Q8IZP2 240 aaPredicted RBP14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 COLGALT1Q8NBJ5 622 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CLEC4CQ8WTT0 213 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CELF6Q96J87 481 aaKnown RBP14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 MIPEPQ99797 713 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 IL1RL2Q9HB29 575 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 CYP4F12Q9HCS2 524 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 ETNK2Q9NVF9 386 aa14.86□□□□□ -0.03
TNFRSF1B-201ENST00000376259 SNTG2Q9NY99 539 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms