RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ETF1P62495 437 aaKnown RBP23.93■■□□□ 1.42
HLA-C-202ENST00000376237 HECTD3Q5T447 861 aa23.93■■□□□ 1.42
HLA-C-202ENST00000376237 MSANTD2Q6P1R3 559 aa23.93■■□□□ 1.42
HLA-C-202ENST00000376237 KLHDC10Q6PID8 442 aa23.93■■□□□ 1.42
HLA-C-202ENST00000376237 PDZD4Q76G19 769 aaPredicted RBP23.93■■□□□ 1.42
HLA-C-202ENST00000376237 MRPS31Q92665 395 aaKnown RBP23.93■■□□□ 1.42
HLA-C-202ENST00000376237 DNMT3BQ9UBC3 853 aaKnown RBP23.93■■□□□ 1.42
HLA-C-202ENST00000376237 AMFRQ9UKV5 643 aa23.93■■□□□ 1.42
HLA-C-202ENST00000376237 ZNF197O14709 1029 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 TLR5O60602 858 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 GBP1P32455 592 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 PCK1P35558 622 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 ATP11AP98196 1134 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 ANKRD54Q6NXT1 300 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 PEX26Q7Z412 305 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 BNIPLQ7Z465 357 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 TMEM150AQ86TG1 271 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 HS6ST3Q8IZP7 471 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 SLC35F6Q8N357 371 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 SMG7Q92540 1137 aaKnown RBP23.92■■□□□ 1.42
HLA-C-202ENST00000376237 FAM161BQ96MY7 647 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 SMOC2Q9H3U7 446 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 JRKLQ9Y4A0 524 aa23.92■■□□□ 1.42
HLA-C-202ENST00000376237 MYO9BQ13459 2157 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 M0QYT0 321 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 SPOPO43791 374 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 TADA3O75528 432 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 TRUB2O95900 331 aaKnown RBP23.91■■□□□ 1.42
HLA-C-202ENST00000376237 RHOP08100 348 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 MYL4P12829 197 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 PFKLP17858 780 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 COMTP21964 271 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 ATP5C1P36542 298 aaKnown RBP23.91■■□□□ 1.42
HLA-C-202ENST00000376237 C15orf59Q2T9L4 293 aaPredicted RBP23.91■■□□□ 1.42
HLA-C-202ENST00000376237 CC2D1AQ6P1N0 951 aaPredicted RBP23.91■■□□□ 1.42
HLA-C-202ENST00000376237 GAREM2Q75VX8 874 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 DQX1Q8TE96 717 aaKnown RBP23.91■■□□□ 1.42
HLA-C-202ENST00000376237 FAM172AQ8WUF8 416 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 C16orf45Q96MC5 204 aaPredicted RBP23.91■■□□□ 1.42
HLA-C-202ENST00000376237 SERPINB11Q96P15 392 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 TBCBQ99426 244 aa23.91■■□□□ 1.42
HLA-C-202ENST00000376237 SOBPA7XYQ1 873 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 LINC01565O15544 149 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 LRCH4O75427 683 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 RDXP35241 583 aaKnown RBP23.9■■□□□ 1.42
HLA-C-202ENST00000376237 HADHQ16836 314 aaKnown RBP23.9■■□□□ 1.42
HLA-C-202ENST00000376237 CDO1Q16878 200 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 CTC1Q2NKJ3 1217 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 C10orf120Q5SQS8 335 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 TMC5Q6UXY8 1006 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 NT5DC3Q86UY8 548 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 ATXN3LQ9H3M9 355 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 GOLPH3Q9H4A6 298 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 HCFC1R1Q9NWW0 138 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 ZMYM5Q9UJ78 669 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 USTQ9Y2C2 406 aa23.9■■□□□ 1.42
HLA-C-202ENST00000376237 MIF4GDA9UHW6 222 aaKnown RBP23.89■■□□□ 1.42
HLA-C-202ENST00000376237 IGLV3-25P01717 112 aa23.89■■□□□ 1.42
HLA-C-202ENST00000376237 DDX6P26196 483 aaKnown RBP eCLIP23.89■■□□□ 1.427e-14■■□□□ 12.5
HLA-C-202ENST00000376237 KPNA1P52294 538 aaPredicted RBP23.89■■□□□ 1.42
HLA-C-202ENST00000376237 DEUP1Q05D60 604 aa23.89■■□□□ 1.42
HLA-C-202ENST00000376237 NNTQ13423 1086 aa23.89■■□□□ 1.42
HLA-C-202ENST00000376237 COL19A1Q14993 1142 aa23.89■■□□□ 1.42
HLA-C-202ENST00000376237 SND1Q7KZF4 910 aaKnown RBP eCLIP23.89■■□□□ 1.422e-9■■■■□ 20.1
HLA-C-202ENST00000376237 GRASPQ7Z6J2 395 aaPredicted RBP23.89■■□□□ 1.42
HLA-C-202ENST00000376237 GPR149Q86SP6 731 aa23.89■■□□□ 1.42
HLA-C-202ENST00000376237 C12orf76Q8N812 135 aaPredicted RBP23.89■■□□□ 1.42
HLA-C-202ENST00000376237 CCSER2Q9H7U1 834 aa23.89■■□□□ 1.42
HLA-C-202ENST00000376237 FAM204AQ9H8W3 233 aa23.89■■□□□ 1.42
HLA-C-202ENST00000376237 DDIT4Q9NX09 232 aa23.89■■□□□ 1.42
HLA-C-202ENST00000376237 DNMT3LQ9UJW3 386 aa23.89■■□□□ 1.42
HLA-C-202ENST00000376237 CLUHO75153 1309 aa23.89■■□□□ 1.42
HLA-C-202ENST00000376237 ZNF638Q14966 1978 aaKnown RBP23.89■■□□□ 1.41
HLA-C-202ENST00000376237 FTCDO95954 541 aa23.89■■□□□ 1.41
HLA-C-202ENST00000376237 OAS1P00973 400 aaKnown RBP23.89■■□□□ 1.41
HLA-C-202ENST00000376237 HDAC4P56524 1084 aa23.89■■□□□ 1.41
HLA-C-202ENST00000376237 ITIH3Q06033 890 aa23.89■■□□□ 1.41
HLA-C-202ENST00000376237 HABP4Q5JVS0 413 aaKnown RBP23.89■■□□□ 1.41
HLA-C-202ENST00000376237 SH3PXD2AQ5TCZ1 1133 aa23.89■■□□□ 1.41
HLA-C-202ENST00000376237 MEI1Q5TIA1 1274 aa23.89■■□□□ 1.41
HLA-C-202ENST00000376237 LRRC38Q5VT99 294 aa23.89■■□□□ 1.41
HLA-C-202ENST00000376237 TAC4Q86UU9 113 aa23.89■■□□□ 1.41
HLA-C-202ENST00000376237 ARFGAP1Q8N6T3 406 aa23.89■■□□□ 1.41
HLA-C-202ENST00000376237 NACA2Q9H009 215 aa23.89■■□□□ 1.41
HLA-C-202ENST00000376237 A0A1W2PRU2 124 aa23.88■■□□□ 1.41
HLA-C-202ENST00000376237 TFE3P19532 575 aaPredicted RBP23.88■■□□□ 1.41
HLA-C-202ENST00000376237 PITX1P78337 314 aaPredicted RBP23.88■■□□□ 1.41
HLA-C-202ENST00000376237 NME3Q13232 169 aa23.88■■□□□ 1.41
HLA-C-202ENST00000376237 EIF4EBP2Q13542 120 aaPredicted RBP23.88■■□□□ 1.41
HLA-C-202ENST00000376237 ARHGAP15Q53QZ3 475 aa23.88■■□□□ 1.41
HLA-C-202ENST00000376237 RARS2Q5T160 578 aaKnown RBP23.88■■□□□ 1.41
HLA-C-202ENST00000376237 OTUD1Q5VV17 481 aaPredicted RBP23.88■■□□□ 1.41
HLA-C-202ENST00000376237 SYCE2Q6PIF2 218 aa23.88■■□□□ 1.41
HLA-C-202ENST00000376237 RHOT1Q8IXI2 618 aa23.88■■□□□ 1.41
HLA-C-202ENST00000376237 PABPC5Q96DU9 382 aaKnown RBP23.88■■□□□ 1.41
HLA-C-202ENST00000376237 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.88■■□□□ 1.41
HLA-C-202ENST00000376237 MARCH2Q9P0N8 246 aa23.88■■□□□ 1.41
HLA-C-202ENST00000376237 NUDT5Q9UKK9 219 aa23.88■■□□□ 1.41
HLA-C-202ENST00000376237 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.88■■□□□ 1.41
HLA-C-202ENST00000376237 HYOU1Q9Y4L1 999 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms